40S ribosomal protein SA

Quick info Annotations Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:

Gene product:

40S ribosomal protein SA - putative

Species:

Leishmania infantum

UniProt:

RSSA_LEIIN

TriTrypDb:

LINF_360060700

Length:

246

Annotations

Annotations by Jardim et al.

Ribosomal Protein, 40S ribosomal SA LinJ36.5570

Localization

Secreted promastigote


Source	Evidence on protein	Close homologs
Cuervo et al.	no	yes: 0
Hassani et al.	no	yes: 0
Forrest at al. (metacyclic)	yes	yes: 4
Forrest at al. (procyclic)	yes	yes: 4
Silverman et al.	no	yes: 0
Pissara et al.	yes	yes: 18

Secreted amastigote


Source	Evidence on protein	Close homologs
Pires et al.	no	yes: 0

Exosome


Source	Evidence on protein	Close homologs
Silverman et al.	no	yes: 0

Glycosome


Source	Evidence on protein	Close homologs
Jamdhade et al.	no	yes: 0

Predictions


Source	Evidence on protein	Close homologs
DeepLoc
SignalP6	no	yes: 0, no: 10
NetGPI	no	yes: 0, no: 10

Show entries

Cellular components
Term	Name	Level	Count
GO:0005737	cytoplasm	2	1
GO:0015935	small ribosomal subunit	4	11
GO:0022627	cytosolic small ribosomal subunit	5	11
GO:0032991	protein-containing complex	1	11
GO:0044391	ribosomal subunit	3	11
GO:0110165	cellular anatomical entity	1	1
GO:1990904	ribonucleoprotein complex	2	11

Previous1Next

Expansion

Sequence features

A4IDS4

Sequence

MSA

Disorder

Secondary

Topology

Domains

SignalP

GPI

Phosphorylations

ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: A4IDS4

PDB structure(s): 6az1_B

Function

Show entries

Biological processes
Term	Name	Level	Count
GO:0000028	ribosomal small subunit assembly	7	11
GO:0002181	cytoplasmic translation	5	1
GO:0006412	translation	4	11
GO:0006518	peptide metabolic process	4	11
GO:0006807	nitrogen compound metabolic process	2	11
GO:0008152	metabolic process	1	11
GO:0009058	biosynthetic process	2	11
GO:0009059	macromolecule biosynthetic process	4	11
GO:0009987	cellular process	1	11
GO:0016043	cellular component organization	3	11

Previous1 2 3 4Next

Show entries

Molecular functions
Term	Name	Level	Count
GO:0003735	structural constituent of ribosome	2	11
GO:0005198	structural molecule activity	1	11

Previous1Next

Putative motif mimicry

Show entries


Leishmania	From	To	Domain/Motif	Score
CLV_PCSK_SKI1_1	169	173	PF00082	0.460
CLV_PCSK_SKI1_1	183	187	PF00082	0.316
CLV_PCSK_SKI1_1	60	64	PF00082	0.434
CLV_Separin_Metazoa	184	188	PF03568	0.436
DOC_MAPK_MEF2A_6	117	126	PF00069	0.401
DOC_MAPK_MEF2A_6	138	147	PF00069	0.400
DOC_PP4_FxxP_1	119	122	PF00568	0.400
DOC_USP7_MATH_1	3	7	PF00917	0.749
DOC_USP7_MATH_1	46	50	PF00917	0.581
LIG_14-3-3_CanoR_1	31	41	PF00244	0.604

Previous1 2 3 4 5Next

Homologs

Show entries


Protein	Taxonomy	Sequence identity	Coverage
A0A0N0P214	Leptomonas seymouri	93%	100%
A0A0S4JPJ9	Bodo saltans	70%	100%
A0A1X0NEL3	Trypanosomatidae	79%	100%
A0A3Q8IWD8	Leishmania donovani	100%	100%
A0B6E5	Methanothrix thermoacetophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT)	44%	100%
A0JUP1	Arthrobacter sp. (strain FB24)	24%	84%
A0RY14	Cenarchaeum symbiosum (strain A)	35%	100%
A1BHZ5	Chlorobium phaeobacteroides (strain DSM 266)	25%	98%
A1CL63	Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107)	53%	83%
A1D695	Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181)	53%	83%

Previous1 2 3 4 5…28Next