Trm112p-domain-containing protein

Quick info Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:

Gene product:

Trm112p-like protein, putative

Species:

Leishmania major

UniProt:

Q4QJ62_LEIMA

TriTrypDb:

LmjF.06.0170 , LMJLV39_060006600 , LMJSD75_060006600

Length:

141

Localization

Secreted promastigote


Source	Evidence on protein	Close homologs
Cuervo et al.	no	yes: 0
Hassani et al.	no	yes: 0
Forrest at al. (metacyclic)	no	yes: 0
Forrest at al. (procyclic)	no	yes: 0
Silverman et al.	no	yes: 0
Pissara et al.	no	yes: 0

Secreted amastigote


Source	Evidence on protein	Close homologs
Pires et al.	no	yes: 0

Exosome


Source	Evidence on protein	Close homologs
Silverman et al.	no	yes: 0

Glycosome


Source	Evidence on protein	Close homologs
Jamdhade et al.	no	yes: 0

Predictions


Source	Evidence on protein	Close homologs
DeepLoc
SignalP6	no	yes: 0, no: 10
NetGPI	no	yes: 0, no: 10

Cellular components
Term	Name	Level	Count
GO:0005654	nucleoplasm	2	2
GO:0005730	nucleolus	5	2
GO:0005737	cytoplasm	2	2
GO:0043226	organelle	2	2
GO:0043228	non-membrane-bounded organelle	3	2
GO:0043229	intracellular organelle	3	2
GO:0043232	intracellular non-membrane-bounded organelle	4	2
GO:0110165	cellular anatomical entity	1	2

Expansion

Sequence features

Q4QJ62

Sequence

MSA

Disorder

Secondary

Topology

Domains

SignalP

GPI

Phosphorylations

ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: Q4QJ62

Function

Biological processes
Term	Name	Level	Count
GO:0000154	rRNA modification	6	2
GO:0001510	RNA methylation	4	2
GO:0006139	nucleobase-containing compound metabolic process	3	2
GO:0006364	rRNA processing	8	2
GO:0006396	RNA processing	6	2
GO:0006399	tRNA metabolic process	7	2
GO:0006400	tRNA modification	6	2
GO:0006479	protein methylation	4	2
GO:0006725	cellular aromatic compound metabolic process	3	2
GO:0006807	nitrogen compound metabolic process	2	2
GO:0008033	tRNA processing	8	2
GO:0008152	metabolic process	1	4
GO:0008213	protein alkylation	5	2
GO:0009451	RNA modification	5	2
GO:0009987	cellular process	1	2
GO:0016070	RNA metabolic process	5	2
GO:0016072	rRNA metabolic process	7	2
GO:0018364	peptidyl-glutamine methylation	5	2
GO:0019538	protein metabolic process	3	2
GO:0030488	tRNA methylation	5	2
GO:0031167	rRNA methylation	5	2
GO:0032259	methylation	2	4
GO:0034470	ncRNA processing	7	2
GO:0034641	cellular nitrogen compound metabolic process	3	2
GO:0034660	ncRNA metabolic process	6	2
GO:0036211	protein modification process	4	2
GO:0036265	RNA (guanine-N7)-methylation	5	2
GO:0043170	macromolecule metabolic process	3	2
GO:0043412	macromolecule modification	4	2
GO:0043414	macromolecule methylation	3	2
GO:0044237	cellular metabolic process	2	2
GO:0044238	primary metabolic process	2	2
GO:0044260	obsolete cellular macromolecule metabolic process	3	2
GO:0046483	heterocycle metabolic process	3	2
GO:0070475	rRNA base methylation	6	2
GO:0070476	rRNA (guanine-N7)-methylation	6	2
GO:0071704	organic substance metabolic process	2	2
GO:0090304	nucleic acid metabolic process	4	2
GO:1901360	organic cyclic compound metabolic process	3	2
GO:1901564	organonitrogen compound metabolic process	3	2

Molecular functions
Term	Name	Level	Count
GO:0005488	binding	1	11
GO:0005515	protein binding	2	11
GO:0046982	protein heterodimerization activity	4	11
GO:0046983	protein dimerization activity	3	11
GO:0003824	catalytic activity	1	2
GO:0008168	methyltransferase activity	4	2
GO:0016740	transferase activity	2	2
GO:0016741	transferase activity, transferring one-carbon groups	3	2

Putative motif mimicry


Leishmania	From	To	Domain/Motif	Score
CLV_NRD_NRD_1	39	41	PF00675	0.286
CLV_PCSK_KEX2_1	39	41	PF00082	0.286
CLV_PCSK_SKI1_1	2	6	PF00082	0.308
CLV_PCSK_SKI1_1	39	43	PF00082	0.244
DEG_APCC_DBOX_1	38	46	PF00400	0.455
DEG_Nend_UBRbox_1	1	4	PF02207	0.335
DOC_USP7_MATH_1	60	64	PF00917	0.507
DOC_USP7_MATH_1	79	83	PF00917	0.564
LIG_14-3-3_CanoR_1	2	9	PF00244	0.294
LIG_14-3-3_CanoR_1	51	55	PF00244	0.516
LIG_Actin_WH2_2	38	53	PF00022	0.514
LIG_FHA_1	124	130	PF00498	0.512
LIG_FHA_1	14	20	PF00498	0.559
LIG_FHA_2	20	26	PF00498	0.496
LIG_LIR_Gen_1	46	54	PF02991	0.474
LIG_LIR_Nem_3	15	20	PF02991	0.519
LIG_LIR_Nem_3	46	50	PF02991	0.472
LIG_LIR_Nem_3	52	57	PF02991	0.481
LIG_LYPXL_yS_3	17	20	PF13949	0.519
LIG_Pex14_2	132	136	PF04695	0.501
LIG_SH2_CRK	47	51	PF00017	0.453
LIG_SH2_STAP1	106	110	PF00017	0.535
LIG_SH2_STAP1	33	37	PF00017	0.497
LIG_SH3_3	61	67	PF00018	0.569
LIG_SUMO_SIM_par_1	15	22	PF11976	0.487
LIG_TYR_ITIM	45	50	PF00017	0.507
MOD_CK1_1	49	55	PF00069	0.526
MOD_CK1_1	95	101	PF00069	0.461
MOD_CK2_1	19	25	PF00069	0.510
MOD_CK2_1	65	71	PF00069	0.547
MOD_GlcNHglycan	96	100	PF01048	0.307
MOD_GSK3_1	46	53	PF00069	0.535
MOD_N-GLC_1	114	119	PF02516	0.359
MOD_NEK2_1	100	105	PF00069	0.503
MOD_NEK2_1	19	24	PF00069	0.511
MOD_NEK2_1	50	55	PF00069	0.501
MOD_NEK2_2	60	65	PF00069	0.507
MOD_PKA_2	50	56	PF00069	0.516
MOD_Plk_1	95	101	PF00069	0.508
TRG_DiLeu_BaLyEn_6	15	20	PF01217	0.519
TRG_ENDOCYTIC_2	17	20	PF00928	0.519
TRG_ENDOCYTIC_2	47	50	PF00928	0.455
TRG_ER_diArg_1	39	41	PF00400	0.487

Homologs


Protein	Taxonomy	Sequence identity	Coverage
A0A0N0P6H9	Leptomonas seymouri	65%	100%
A0A0S4J2Y9	Bodo saltans	45%	100%
A0A1X0NJI9	Trypanosomatidae	43%	100%
A0A3S5H5N5	Leishmania donovani	95%	100%
A0A422NC88	Trypanosoma rangeli	41%	100%
A4H4I3	Leishmania braziliensis	83%	100%
A4HSQ8	Leishmania infantum	95%	100%
C9ZTA4	Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972)	42%	100%
E9AKP5	Leishmania mexicana (strain MHOM/GT/2001/U1103)	94%	100%
O45241	Caenorhabditis elegans	31%	100%
Q2KIA2	Bos taurus	29%	100%
Q8LFJ5	Arabidopsis thaliana	29%	100%
Q9C9R3	Arabidopsis thaliana	27%	100%
Q9DCG9	Mus musculus	32%	100%
Q9UI30	Homo sapiens	30%	100%