RNA-binding protein 5-like protein

Quick info Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:

Gene product:

RNA-binding protein 5-like protein

Species:

Leishmania major

UniProt:

Q4QI27_LEIMA

TriTrypDb:

LmjF.09.0080 , LMJLV39_090006000 , LMJSD75_090006000

Length:

245

Localization

Secreted promastigote


Source	Evidence on protein	Close homologs
Cuervo et al.	no	yes: 0
Hassani et al.	no	yes: 0
Forrest at al. (metacyclic)	no	yes: 0
Forrest at al. (procyclic)	no	yes: 0
Silverman et al.	no	yes: 0
Pissara et al.	no	yes: 0

Secreted amastigote


Source	Evidence on protein	Close homologs
Pires et al.	no	yes: 0

Exosome


Source	Evidence on protein	Close homologs
Silverman et al.	no	yes: 0

Glycosome


Source	Evidence on protein	Close homologs
Jamdhade et al.	no	yes: 0

Predictions


Source	Evidence on protein	Close homologs
DeepLoc
SignalP6	no	yes: 0, no: 6
NetGPI	no	yes: 0, no: 6

Cellular components
Term	Name	Level	Count
GO:0005634	nucleus	5	2
GO:0032991	protein-containing complex	1	2
GO:0043226	organelle	2	2
GO:0043227	membrane-bounded organelle	3	2
GO:0043229	intracellular organelle	3	2
GO:0043231	intracellular membrane-bounded organelle	4	2
GO:0110165	cellular anatomical entity	1	2
GO:1990904	ribonucleoprotein complex	2	2

Expansion

Sequence features

Q4QI27

Sequence

MSA

Disorder

Secondary

Topology

Domains

SignalP

GPI

Phosphorylations

ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: Q4QI27

Function

Could not find GO biological_process term for this entry.

Molecular functions
Term	Name	Level	Count
GO:0003676	nucleic acid binding	3	7
GO:0003723	RNA binding	4	7
GO:0005488	binding	1	7
GO:0097159	organic cyclic compound binding	2	7
GO:1901363	heterocyclic compound binding	2	7

Putative motif mimicry


Leishmania	From	To	Domain/Motif	Score
CLV_C14_Caspase3-7	132	136	PF00656	0.534
CLV_NRD_NRD_1	94	96	PF00675	0.595
CLV_PCSK_KEX2_1	94	96	PF00082	0.595
CLV_PCSK_PC7_1	90	96	PF00082	0.366
DEG_SIAH_1	162	170	PF03145	0.601
DOC_CKS1_1	108	113	PF01111	0.607
DOC_CYCLIN_yCln2_LP_2	108	114	PF00134	0.610
DOC_USP7_MATH_1	150	154	PF00917	0.529
DOC_USP7_MATH_1	157	161	PF00917	0.719
DOC_USP7_MATH_1	171	175	PF00917	0.498
DOC_USP7_MATH_1	54	58	PF00917	0.467
DOC_USP7_MATH_1	7	11	PF00917	0.548
DOC_USP7_MATH_1	98	102	PF00917	0.464
DOC_WW_Pin1_4	107	112	PF00397	0.660
DOC_WW_Pin1_4	114	119	PF00397	0.687
DOC_WW_Pin1_4	159	164	PF00397	0.623
DOC_WW_Pin1_4	175	180	PF00397	0.679
DOC_WW_Pin1_4	38	43	PF00397	0.446
LIG_14-3-3_CanoR_1	170	180	PF00244	0.558
LIG_14-3-3_CanoR_1	45	52	PF00244	0.446
LIG_14-3-3_CanoR_1	53	63	PF00244	0.446
LIG_APCC_ABBA_1	65	70	PF00400	0.446
LIG_BRCT_BRCA1_1	100	104	PF00533	0.489
LIG_BRCT_BRCA1_2	100	106	PF00533	0.540
LIG_FHA_1	123	129	PF00498	0.559
LIG_FHA_2	130	136	PF00498	0.558
LIG_LIR_Gen_1	101	112	PF02991	0.508
LIG_LIR_Gen_1	161	172	PF02991	0.559
LIG_LIR_Gen_1	205	215	PF02991	0.581
LIG_LIR_Nem_3	101	107	PF02991	0.485
LIG_LIR_Nem_3	161	167	PF02991	0.555
LIG_LIR_Nem_3	185	189	PF02991	0.674
LIG_LIR_Nem_3	205	210	PF02991	0.421
LIG_LIR_Nem_3	38	43	PF02991	0.491
LIG_LIR_Nem_3	60	66	PF02991	0.588
LIG_MAD2	106	114	PF02301	0.604
LIG_PTB_Apo_2	180	187	PF02174	0.659
LIG_PTB_Phospho_1	180	186	PF10480	0.657
LIG_SH2_CRK	164	168	PF00017	0.563
LIG_SH2_CRK	186	190	PF00017	0.541
LIG_SH2_CRK	43	47	PF00017	0.446
LIG_SH2_CRK	63	67	PF00017	0.461
LIG_SH2_NCK_1	164	168	PF00017	0.628
LIG_SH2_PTP2	227	230	PF00017	0.524
LIG_SH2_SRC	164	167	PF00017	0.630
LIG_SH2_STAP1	164	168	PF00017	0.559
LIG_SH2_STAT3	155	158	PF00017	0.531
LIG_SH2_STAT3	172	175	PF00017	0.628
LIG_SH2_STAT5	206	209	PF00017	0.612
LIG_SH2_STAT5	227	230	PF00017	0.524
LIG_SH2_STAT5	23	26	PF00017	0.481
LIG_SH3_3	108	114	PF00018	0.610
LIG_SH3_3	131	137	PF00018	0.538
LIG_SH3_3	226	232	PF00018	0.697
MOD_CDK_SPxxK_3	38	45	PF00069	0.446
MOD_CK1_1	116	122	PF00069	0.608
MOD_CK1_1	57	63	PF00069	0.446
MOD_CK2_1	69	75	PF00069	0.493
MOD_CK2_1	7	13	PF00069	0.483
MOD_GlcNHglycan	202	205	PF01048	0.558
MOD_GlcNHglycan	47	50	PF01048	0.281
MOD_GlcNHglycan	72	75	PF01048	0.261
MOD_GSK3_1	113	120	PF00069	0.726
MOD_GSK3_1	12	19	PF00069	0.501
MOD_GSK3_1	171	178	PF00069	0.633
MOD_GSK3_1	23	30	PF00069	0.513
MOD_GSK3_1	98	105	PF00069	0.538
MOD_N-GLC_1	122	127	PF02516	0.700
MOD_NEK2_1	102	107	PF00069	0.574
MOD_NEK2_1	129	134	PF00069	0.653
MOD_NEK2_1	142	147	PF00069	0.456
MOD_NEK2_1	16	21	PF00069	0.532
MOD_NEK2_2	150	155	PF00069	0.480
MOD_PIKK_1	117	123	PF00454	0.616
MOD_PIKK_1	171	177	PF00454	0.545
MOD_Plk_1	12	18	PF00069	0.598
MOD_Plk_1	98	104	PF00069	0.533
MOD_Plk_4	150	156	PF00069	0.523
MOD_Plk_4	202	208	PF00069	0.597
MOD_ProDKin_1	107	113	PF00069	0.663
MOD_ProDKin_1	114	120	PF00069	0.690
MOD_ProDKin_1	159	165	PF00069	0.625
MOD_ProDKin_1	175	181	PF00069	0.679
MOD_ProDKin_1	38	44	PF00069	0.446
TRG_ENDOCYTIC_2	164	167	PF00928	0.565
TRG_ENDOCYTIC_2	186	189	PF00928	0.544
TRG_ENDOCYTIC_2	227	230	PF00928	0.574
TRG_ENDOCYTIC_2	43	46	PF00928	0.446
TRG_ENDOCYTIC_2	63	66	PF00928	0.461
TRG_ER_diArg_1	93	95	PF00400	0.592

Homologs


Protein	Taxonomy	Sequence identity	Coverage
A0A0N0P379	Leptomonas seymouri	47%	100%
A0A3S5H6A8	Leishmania donovani	93%	100%
A4H5I5	Leishmania braziliensis	81%	100%
A4HTS6	Leishmania infantum	93%	100%
E9AMK9	Leishmania mexicana (strain MHOM/GT/2001/U1103)	91%	100%
P0CB38	Homo sapiens	23%	66%