Mitochondrial RNA binding complex 1 subunit

Quick info Localization Expansion Sequence features Structure Putative motif mimicry Homologs Download

Quick info

Protein:

Gene product:

hypothetical protein, conserved

Species:

Leishmania major

UniProt:

Q4Q4M8_LEIMA

TriTrypDb:

LmjF.32.3940 , LMJLV39_320047300 , LMJSD75_320047500

Length:

556

Localization

Secreted promastigote


Source	Evidence on protein	Close homologs
Cuervo et al.	no	yes: 0
Hassani et al.	no	yes: 0
Forrest at al. (metacyclic)	no	yes: 0
Forrest at al. (procyclic)	no	yes: 0
Silverman et al.	no	yes: 0
Pissara et al.	no	yes: 0

Secreted amastigote


Source	Evidence on protein	Close homologs
Pires et al.	no	yes: 0

Exosome


Source	Evidence on protein	Close homologs
Silverman et al.	no	yes: 0

Glycosome


Source	Evidence on protein	Close homologs
Jamdhade et al.	no	yes: 0

Predictions


Source	Evidence on protein	Close homologs
DeepLoc
SignalP6	no	yes: 0, no: 11
NetGPI	no	yes: 0, no: 11

Could not find GO cellular_component term for this entry.

Expansion

Sequence features

Q4Q4M8

Sequence

MSA

Disorder

Secondary

Topology

Domains

SignalP

GPI

Phosphorylations

ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: Q4Q4M8

Putative motif mimicry


Leishmania	From	To	Domain/Motif	Score
CLV_C14_Caspase3-7	341	345	PF00656	0.454
CLV_NRD_NRD_1	100	102	PF00675	0.475
CLV_NRD_NRD_1	148	150	PF00675	0.527
CLV_NRD_NRD_1	386	388	PF00675	0.404
CLV_NRD_NRD_1	418	420	PF00675	0.536
CLV_NRD_NRD_1	516	518	PF00675	0.365
CLV_NRD_NRD_1	88	90	PF00675	0.466
CLV_PCSK_KEX2_1	100	102	PF00082	0.393
CLV_PCSK_KEX2_1	148	150	PF00082	0.507
CLV_PCSK_KEX2_1	386	388	PF00082	0.395
CLV_PCSK_KEX2_1	516	518	PF00082	0.365
CLV_PCSK_KEX2_1	537	539	PF00082	0.427
CLV_PCSK_KEX2_1	88	90	PF00082	0.421
CLV_PCSK_PC1ET2_1	537	539	PF00082	0.430
CLV_PCSK_SKI1_1	118	122	PF00082	0.442
CLV_PCSK_SKI1_1	149	153	PF00082	0.478
CLV_PCSK_SKI1_1	162	166	PF00082	0.557
CLV_PCSK_SKI1_1	195	199	PF00082	0.536
CLV_PCSK_SKI1_1	288	292	PF00082	0.594
CLV_PCSK_SKI1_1	419	423	PF00082	0.407
CLV_PCSK_SKI1_1	488	492	PF00082	0.493
CLV_PCSK_SKI1_1	529	533	PF00082	0.428
DEG_APCC_DBOX_1	148	156	PF00400	0.463
DEG_APCC_DBOX_1	161	169	PF00400	0.537
DEG_APCC_DBOX_1	528	536	PF00400	0.483
DEG_SCF_FBW7_1	75	81	PF00400	0.573
DOC_CDC14_PxL_1	449	457	PF14671	0.512
DOC_CKS1_1	75	80	PF01111	0.582
DOC_CYCLIN_RxL_1	294	306	PF00134	0.580
DOC_CYCLIN_RxL_1	364	372	PF00134	0.475
DOC_CYCLIN_yCln2_LP_2	304	310	PF00134	0.460
DOC_MAPK_DCC_7	173	181	PF00069	0.543
DOC_MAPK_gen_1	300	310	PF00069	0.533
DOC_MAPK_gen_1	537	548	PF00069	0.492
DOC_MAPK_MEF2A_6	541	550	PF00069	0.484
DOC_PP1_RVXF_1	417	424	PF00149	0.432
DOC_PP4_MxPP_1	211	214	PF00568	0.321
DOC_USP7_MATH_1	120	124	PF00917	0.543
DOC_USP7_MATH_1	207	211	PF00917	0.539
DOC_USP7_MATH_1	445	449	PF00917	0.499
DOC_USP7_MATH_1	78	82	PF00917	0.543
DOC_WW_Pin1_4	209	214	PF00397	0.475
DOC_WW_Pin1_4	303	308	PF00397	0.557
DOC_WW_Pin1_4	74	79	PF00397	0.574
DOC_WW_Pin1_4	8	13	PF00397	0.565
LIG_14-3-3_CanoR_1	19	24	PF00244	0.515
LIG_14-3-3_CanoR_1	199	205	PF00244	0.515
LIG_14-3-3_CanoR_1	387	397	PF00244	0.287
LIG_14-3-3_CanoR_1	425	430	PF00244	0.439
LIG_14-3-3_CanoR_1	475	480	PF00244	0.371
LIG_14-3-3_CanoR_1	517	523	PF00244	0.489
LIG_Actin_WH2_2	184	201	PF00022	0.509
LIG_Actin_WH2_2	472	490	PF00022	0.395
LIG_CaM_NSCaTE_8	229	236	PF13499	0.455
LIG_Clathr_ClatBox_1	353	357	PF01394	0.375
LIG_FHA_1	122	128	PF00498	0.550
LIG_FHA_1	349	355	PF00498	0.374
LIG_FHA_1	356	362	PF00498	0.343
LIG_FHA_1	390	396	PF00498	0.482
LIG_FHA_1	487	493	PF00498	0.466
LIG_FHA_2	220	226	PF00498	0.459
LIG_FHA_2	243	249	PF00498	0.505
LIG_FHA_2	397	403	PF00498	0.394
LIG_FHA_2	42	48	PF00498	0.443
LIG_FHA_2	498	504	PF00498	0.560
LIG_GBD_Chelix_1	277	285	PF00786	0.397
LIG_HCF-1_HBM_1	372	375	PF13415	0.516
LIG_LIR_Gen_1	22	30	PF02991	0.427
LIG_LIR_Gen_1	267	277	PF02991	0.460
LIG_LIR_Gen_1	309	319	PF02991	0.479
LIG_LIR_Gen_1	372	383	PF02991	0.486
LIG_LIR_Nem_3	22	26	PF02991	0.428
LIG_LIR_Nem_3	254	259	PF02991	0.437
LIG_LIR_Nem_3	267	272	PF02991	0.408
LIG_LIR_Nem_3	309	314	PF02991	0.447
LIG_LIR_Nem_3	372	377	PF02991	0.450
LIG_LIR_Nem_3	62	68	PF02991	0.411
LIG_LYPXL_yS_3	382	385	PF13949	0.392
LIG_MYND_1	552	556	PF01753	0.578
LIG_NRBOX	131	137	PF00104	0.562
LIG_NRBOX	506	512	PF00104	0.488
LIG_PCNA_PIPBox_1	368	377	PF02747	0.549
LIG_PCNA_yPIPBox_3	366	375	PF02747	0.437
LIG_SH2_CRK	256	260	PF00017	0.423
LIG_SH2_CRK	66	70	PF00017	0.421
LIG_SH2_STAP1	264	268	PF00017	0.484
LIG_SH2_STAP1	325	329	PF00017	0.466
LIG_SH2_STAP1	335	339	PF00017	0.501
LIG_SH2_STAT3	377	380	PF00017	0.547
LIG_SH2_STAT5	36	39	PF00017	0.601
LIG_SH2_STAT5	436	439	PF00017	0.477
LIG_SH2_STAT5	486	489	PF00017	0.403
LIG_SH2_STAT5	518	521	PF00017	0.529
LIG_SH3_2	75	80	PF14604	0.528
LIG_SH3_3	37	43	PF00018	0.491
LIG_SH3_3	390	396	PF00018	0.447
LIG_SH3_3	72	78	PF00018	0.509
LIG_SUMO_SIM_anti_2	22	28	PF11976	0.495
LIG_SUMO_SIM_anti_2	351	358	PF11976	0.346
LIG_SUMO_SIM_par_1	351	358	PF11976	0.346
LIG_TRAF2_1	222	225	PF00917	0.484
LIG_TRAF2_1	346	349	PF00917	0.321
LIG_TYR_ITIM	63	68	PF00017	0.395
LIG_UBA3_1	219	228	PF00899	0.498
LIG_UBA3_1	361	367	PF00899	0.491
LIG_UBA3_1	507	512	PF00899	0.381
LIG_UBA3_1	531	537	PF00899	0.399
LIG_WRC_WIRS_1	269	274	PF05994	0.438
MOD_CDK_SPxK_1	74	80	PF00069	0.608
MOD_CK1_1	338	344	PF00069	0.540
MOD_CK1_1	58	64	PF00069	0.456
MOD_CK2_1	219	225	PF00069	0.477
MOD_CK2_1	242	248	PF00069	0.483
MOD_CK2_1	396	402	PF00069	0.392
MOD_CK2_1	41	47	PF00069	0.446
MOD_CK2_1	497	503	PF00069	0.567
MOD_DYRK1A_RPxSP_1	8	12	PF00069	0.558
MOD_GlcNHglycan	108	111	PF01048	0.573
MOD_GlcNHglycan	195	198	PF01048	0.503
MOD_GlcNHglycan	216	219	PF01048	0.393
MOD_GlcNHglycan	242	245	PF01048	0.562
MOD_GlcNHglycan	344	347	PF01048	0.520
MOD_GSK3_1	15	22	PF00069	0.467
MOD_GSK3_1	151	158	PF00069	0.479
MOD_GSK3_1	219	226	PF00069	0.461
MOD_GSK3_1	319	326	PF00069	0.439
MOD_GSK3_1	338	345	PF00069	0.204
MOD_GSK3_1	4	11	PF00069	0.572
MOD_GSK3_1	421	428	PF00069	0.387
MOD_GSK3_1	475	482	PF00069	0.453
MOD_GSK3_1	486	493	PF00069	0.415
MOD_GSK3_1	55	62	PF00069	0.425
MOD_GSK3_1	74	81	PF00069	0.521
MOD_N-GLC_1	251	256	PF02516	0.563
MOD_NEK2_1	121	126	PF00069	0.560
MOD_NEK2_1	142	147	PF00069	0.461
MOD_NEK2_1	15	20	PF00069	0.434
MOD_NEK2_1	198	203	PF00069	0.510
MOD_NEK2_1	223	228	PF00069	0.484
MOD_NEK2_1	242	247	PF00069	0.251
MOD_NEK2_1	319	324	PF00069	0.448
MOD_NEK2_1	496	501	PF00069	0.546
MOD_NEK2_2	320	325	PF00069	0.440
MOD_NEK2_2	518	523	PF00069	0.530
MOD_PIKK_1	55	61	PF00454	0.437
MOD_PK_1	475	481	PF00069	0.475
MOD_PKA_1	537	543	PF00069	0.395
MOD_PKA_2	198	204	PF00069	0.551
MOD_PKA_2	537	543	PF00069	0.379
MOD_Plk_1	142	148	PF00069	0.531
MOD_Plk_1	251	257	PF00069	0.562
MOD_Plk_1	348	354	PF00069	0.466
MOD_Plk_1	78	84	PF00069	0.545
MOD_Plk_4	131	137	PF00069	0.505
MOD_Plk_4	19	25	PF00069	0.465
MOD_Plk_4	251	257	PF00069	0.532
MOD_Plk_4	313	319	PF00069	0.506
MOD_Plk_4	320	326	PF00069	0.431
MOD_Plk_4	338	344	PF00069	0.346
MOD_Plk_4	389	395	PF00069	0.495
MOD_Plk_4	425	431	PF00069	0.383
MOD_Plk_4	50	56	PF00069	0.483
MOD_Plk_4	59	65	PF00069	0.310
MOD_Plk_4	78	84	PF00069	0.440
MOD_ProDKin_1	209	215	PF00069	0.470
MOD_ProDKin_1	303	309	PF00069	0.557
MOD_ProDKin_1	74	80	PF00069	0.577
MOD_ProDKin_1	8	14	PF00069	0.560
TRG_DiLeu_BaEn_1	349	354	PF01217	0.496
TRG_DiLeu_BaLyEn_6	211	216	PF01217	0.557
TRG_DiLeu_BaLyEn_6	526	531	PF01217	0.484
TRG_ENDOCYTIC_2	256	259	PF00928	0.420
TRG_ENDOCYTIC_2	269	272	PF00928	0.375
TRG_ENDOCYTIC_2	375	378	PF00928	0.400
TRG_ENDOCYTIC_2	382	385	PF00928	0.379
TRG_ENDOCYTIC_2	457	460	PF00928	0.409
TRG_ENDOCYTIC_2	65	68	PF00928	0.396
TRG_ER_diArg_1	148	150	PF00400	0.529
TRG_ER_diArg_1	284	287	PF00400	0.593
TRG_ER_diArg_1	385	387	PF00400	0.425
TRG_ER_diArg_1	515	517	PF00400	0.352
TRG_ER_diArg_1	87	89	PF00400	0.494
TRG_ER_diArg_1	99	101	PF00400	0.517
TRG_Pf-PMV_PEXEL_1	101	105	PF00026	0.518
TRG_Pf-PMV_PEXEL_1	288	292	PF00026	0.664

Homologs


Protein	Taxonomy	Sequence identity	Coverage
A0A0N1II47	Leptomonas seymouri	58%	100%
A0A0S4JG92	Bodo saltans	22%	77%
A0A1X0NRZ6	Trypanosomatidae	40%	99%
A0A3Q8IGL6	Leishmania donovani	95%	100%
A0A422NHU1	Trypanosoma rangeli	42%	98%
A4HL31	Leishmania braziliensis	82%	100%
A4I8L2	Leishmania infantum	95%	100%
D0AAK3	Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972)	37%	92%
E9B3H2	Leishmania mexicana (strain MHOM/GT/2001/U1103)	92%	100%
V5BI03	Trypanosoma cruzi	42%	98%