LeishMANIAdb
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Putative translation elongation factor 1-beta

Quick info Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:
Putative translation elongation factor 1-beta
Gene product:
translation elongation factor 1-beta, putative
Species:
Leishmania major
UniProt:
Q4Q3C1_LEIMA
TriTrypDb:
LmjF.34.0840 , LMJLV39_340015000 , LMJSD75_340015100
Length:
237

Localization

Secreted promastigote
Source Evidence on protein Close homologs
Cuervo et al. no yes: 1
Hassani et al. no yes: 0
Forrest at al. (metacyclic) no yes: 4
Forrest at al. (procyclic) no yes: 4
Silverman et al. no yes: 2
Pissara et al. yes yes: 24
Secreted amastigote
Source Evidence on protein Close homologs
Pires et al. no yes: 0
Exosome
Source Evidence on protein Close homologs
Silverman et al. yes yes: 4
Glycosome
Source Evidence on protein Close homologs
Jamdhade et al. no yes: 8
Predictions
Source Evidence on protein Close homologs
DeepLoc
SignalP6 no yes: 1, no: 22
NetGPI no yes: 0, no: 23
Cellular components
Term Name Level Count
GO:0005829 cytosol 2 3
GO:0005853 eukaryotic translation elongation factor 1 complex 2 24
GO:0032991 protein-containing complex 1 24
GO:0110165 cellular anatomical entity 1 3
GO:0005737 cytoplasm 2 1

Expansion

Sequence features

Q4Q3C1
Sequence
MSA
Disorder
Secondary
Topology
Domains
SignalP
GPI
Phosphorylations
ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: Q4Q3C1

Function

Biological processes
Term Name Level Count
GO:0006414 translational elongation 5 3
GO:0008152 metabolic process 1 3
GO:0009058 biosynthetic process 2 3
GO:0009059 macromolecule biosynthetic process 4 3
GO:0009987 cellular process 1 3
GO:0034645 obsolete cellular macromolecule biosynthetic process 4 3
GO:0043170 macromolecule metabolic process 3 3
GO:0044237 cellular metabolic process 2 3
GO:0044249 cellular biosynthetic process 3 3
GO:0044260 obsolete cellular macromolecule metabolic process 3 3
GO:0071704 organic substance metabolic process 2 3
GO:1901576 organic substance biosynthetic process 3 3
Molecular functions
Term Name Level Count
GO:0003676 nucleic acid binding 3 24
GO:0003746 translation elongation factor activity 4 24
GO:0005085 guanyl-nucleotide exchange factor activity 3 3
GO:0005488 binding 1 24
GO:0008135 translation factor activity, RNA binding 3 24
GO:0030234 enzyme regulator activity 2 3
GO:0030695 GTPase regulator activity 4 3
GO:0045182 translation regulator activity 1 24
GO:0060589 nucleoside-triphosphatase regulator activity 3 3
GO:0090079 translation regulator activity, nucleic acid binding 2 24
GO:0097159 organic cyclic compound binding 2 24
GO:0098772 molecular function regulator activity 1 3
GO:0140677 molecular function activator activity 2 3
GO:0140678 molecular function inhibitor activity 2 3
GO:1901363 heterocyclic compound binding 2 24

Putative motif mimicry

Leishmania From To Domain/Motif Score
CLV_NRD_NRD_1 61 63 PF00675 0.562
CLV_PCSK_KEX2_1 94 96 PF00082 0.767
CLV_PCSK_PC1ET2_1 94 96 PF00082 0.767
CLV_PCSK_SKI1_1 128 132 PF00082 0.653
CLV_PCSK_SKI1_1 134 138 PF00082 0.638
CLV_PCSK_SKI1_1 142 146 PF00082 0.572
CLV_PCSK_SKI1_1 20 24 PF00082 0.533
CLV_PCSK_SKI1_1 49 53 PF00082 0.521
DOC_CYCLIN_yCln2_LP_2 76 82 PF00134 0.678
DOC_MAPK_gen_1 197 205 PF00069 0.368
DOC_MAPK_MEF2A_6 70 78 PF00069 0.670
DOC_PP2B_LxvP_1 76 79 PF13499 0.673
DOC_USP7_MATH_1 150 154 PF00917 0.444
DOC_USP7_MATH_1 85 89 PF00917 0.827
DOC_USP7_UBL2_3 137 141 PF12436 0.616
DOC_USP7_UBL2_3 142 146 PF12436 0.579
DOC_USP7_UBL2_3 16 20 PF12436 0.485
DOC_USP7_UBL2_3 4 8 PF12436 0.549
LIG_APCC_ABBA_1 117 122 PF00400 0.631
LIG_BIR_II_1 1 5 PF00653 0.555
LIG_BRCT_BRCA1_1 152 156 PF00533 0.387
LIG_Clathr_ClatBox_1 202 206 PF01394 0.368
LIG_FHA_1 162 168 PF00498 0.367
LIG_FHA_2 121 127 PF00498 0.626
LIG_FHA_2 27 33 PF00498 0.581
LIG_FHA_2 54 60 PF00498 0.535
LIG_SH2_SRC 57 60 PF00017 0.394
LIG_SH3_3 100 106 PF00018 0.749
LIG_SH3_3 68 74 PF00018 0.611
LIG_SUMO_SIM_par_1 162 168 PF11976 0.388
LIG_SUMO_SIM_par_1 201 208 PF11976 0.368
LIG_TRAF2_1 110 113 PF00917 0.753
LIG_TRAF2_1 123 126 PF00917 0.580
LIG_UBA3_1 154 159 PF00899 0.431
LIG_UBA3_1 202 209 PF00899 0.366
MOD_CK1_1 15 21 PF00069 0.556
MOD_CK2_1 120 126 PF00069 0.651
MOD_CK2_1 53 59 PF00069 0.526
MOD_GlcNHglycan 17 20 PF01048 0.518
MOD_GlcNHglycan 210 213 PF01048 0.387
MOD_Plk_1 161 167 PF00069 0.381
MOD_Plk_2-3 225 231 PF00069 0.399
MOD_Plk_4 150 156 PF00069 0.360
MOD_SUMO_for_1 144 147 PF00179 0.576
MOD_SUMO_rev_2 12 18 PF00179 0.478
MOD_SUMO_rev_2 122 130 PF00179 0.663
MOD_SUMO_rev_2 138 144 PF00179 0.520
MOD_SUMO_rev_2 152 160 PF00179 0.333
MOD_SUMO_rev_2 180 190 PF00179 0.368
MOD_SUMO_rev_2 206 211 PF00179 0.368
MOD_SUMO_rev_2 31 36 PF00179 0.384
MOD_SUMO_rev_2 59 64 PF00179 0.579
TRG_DiLeu_BaEn_4 126 132 PF01217 0.625
TRG_NLS_MonoExtC_3 141 146 PF00514 0.644
TRG_NLS_MonoExtN_4 141 146 PF00514 0.716

Homologs

Protein Taxonomy Sequence identity Coverage
A0A0N0P4W7 Leptomonas seymouri 63% 100%
A0A0N1HZF7 Leptomonas seymouri 80% 100%
A0A0S4JC29 Bodo saltans 56% 100%
A0A0S4JK70 Bodo saltans 68% 97%
A0A1X0P9D3 Trypanosomatidae 58% 100%
A0A1X0PA37 Trypanosomatidae 71% 100%
A0A3Q8IVV7 Leishmania donovani 70% 100%
A0A3R7MFZ8 Trypanosoma rangeli 54% 100%
A0A3S5H7W1 Leishmania donovani 95% 99%
A0A422N8N9 Trypanosoma rangeli 71% 100%
A4HAJ1 Leishmania braziliensis 81% 100%
A4HAJ3 Leishmania braziliensis 80% 77%
A4HAJ7 Leishmania braziliensis 81% 99%
A4HP03 Leishmania braziliensis 64% 100%
A4I9P1 Leishmania infantum 95% 99%
A4IDB2 Leishmania infantum 69% 100%
A5D989 Bos taurus 46% 85%
C9ZN03 Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972) 65% 71%
D0A2X9 Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972) 54% 100%
E9ASR3 Leishmania mexicana (strain MHOM/GT/2001/U1103) 68% 100%
E9B4Q3 Leishmania mexicana (strain MHOM/GT/2001/U1103) 82% 97%
E9B4Q5 Leishmania mexicana (strain MHOM/GT/2001/U1103) 82% 74%
O74173 Schizosaccharomyces pombe (strain 972 / ATCC 24843) 35% 100%
O81918 Beta vulgaris 35% 100%
O96827 Drosophila melanogaster 38% 100%
P12262 Artemia salina 38% 100%
P29522 Bombyx mori 36% 100%
P29545 Oryza sativa subsp. japonica 39% 100%
P29546 Triticum aestivum 33% 100%
P30151 Xenopus laevis 41% 100%
P34460 Caenorhabditis elegans 38% 100%
P34826 Oryctolagus cuniculus 38% 100%
P34827 Trypanosoma cruzi 66% 100%
P48006 Arabidopsis thaliana 36% 100%
P57776 Mus musculus 45% 84%
P93447 Spuriopimpinella brachycarpa 36% 100%
Q40680 Oryza sativa subsp. japonica 35% 100%
Q40682 Oryza sativa subsp. japonica 34% 100%
Q66NE2 Leishmania major 66% 100%
Q68FR9 Rattus norvegicus 47% 84%
Q69BZ7 Penicillium citrinum 32% 100%
Q6DET9 Xenopus tropicalis 37% 100%
Q717R8 Ovis aries 42% 86%
Q84WM9 Arabidopsis thaliana 35% 100%
Q9GRF8 Dictyostelium discoideum 37% 100%
Q9SI20 Arabidopsis thaliana 36% 100%

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LeishMANIAdb - Server version: v0.0.2. - Database version: v0.0.1. - ChangeLog - © 2022-2025 Protein Bioinformatics Research Group, Institute of Enzymology, RCNS