RRM domain-containing protein

Quick info Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:

Gene product:

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative

Species:

Leishmania mexicana

UniProt:

E9B192_LEIMU

TriTrypDb:

LmxM.29.3180

Length:

141

Localization

Secreted promastigote


Source	Evidence on protein	Close homologs
Cuervo et al.	no	yes: 0
Hassani et al.	no	yes: 0
Forrest at al. (metacyclic)	no	yes: 0
Forrest at al. (procyclic)	no	yes: 0
Silverman et al.	no	yes: 0
Pissara et al.	no	yes: 0

Secreted amastigote


Source	Evidence on protein	Close homologs
Pires et al.	no	yes: 0

Exosome


Source	Evidence on protein	Close homologs
Silverman et al.	no	yes: 0

Glycosome


Source	Evidence on protein	Close homologs
Jamdhade et al.	no	yes: 0

Predictions


Source	Evidence on protein	Close homologs
DeepLoc
SignalP6	no	yes: 0, no: 13
NetGPI	no	yes: 0, no: 13

Could not find GO cellular_component term for this entry.

Expansion

Sequence features

E9B192

Sequence

MSA

Disorder

Secondary

Topology

Domains

SignalP

GPI

Phosphorylations

ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: E9B192

Function

Could not find GO biological_process term for this entry.

Molecular functions
Term	Name	Level	Count
GO:0003676	nucleic acid binding	3	14
GO:0003723	RNA binding	4	14
GO:0005488	binding	1	14
GO:0097159	organic cyclic compound binding	2	14
GO:1901363	heterocyclic compound binding	2	14

Putative motif mimicry


Leishmania	From	To	Domain/Motif	Score
CLV_C14_Caspase3-7	53	57	PF00656	0.493
CLV_PCSK_KEX2_1	103	105	PF00082	0.698
CLV_PCSK_PC1ET2_1	103	105	PF00082	0.715
CLV_PCSK_SKI1_1	4	8	PF00082	0.619
DEG_Nend_UBRbox_3	1	3	PF02207	0.664
DOC_CYCLIN_RxL_1	103	115	PF00134	0.725
DOC_MAPK_DCC_7	103	111	PF00069	0.707
DOC_MAPK_gen_1	103	111	PF00069	0.690
DOC_MAPK_MEF2A_6	70	77	PF00069	0.590
DOC_PP1_RVXF_1	2	9	PF00149	0.626
DOC_USP7_MATH_1	127	131	PF00917	0.736
DOC_USP7_MATH_1	83	87	PF00917	0.593
DOC_WW_Pin1_4	79	84	PF00397	0.626
LIG_14-3-3_CanoR_1	23	31	PF00244	0.508
LIG_APCC_ABBA_1	34	39	PF00400	0.540
LIG_LIR_Gen_1	115	126	PF02991	0.644
LIG_LIR_Nem_3	115	121	PF02991	0.707
LIG_LIR_Nem_3	22	28	PF02991	0.476
LIG_LIR_Nem_3	46	52	PF02991	0.471
LIG_PTB_Apo_2	14	21	PF02174	0.508
LIG_PTB_Phospho_1	135	141	PF10480	0.425
LIG_PTB_Phospho_1	14	20	PF10480	0.508
LIG_SH2_CRK	118	122	PF00017	0.645
LIG_SH2_CRK	28	32	PF00017	0.561
LIG_SH2_NCK_1	44	48	PF00017	0.498
LIG_SH2_SRC	44	47	PF00017	0.523
LIG_SH2_STAT3	88	91	PF00017	0.654
LIG_SH2_STAT5	20	23	PF00017	0.495
LIG_SH3_3	102	108	PF00018	0.625
LIG_SH3_3	120	126	PF00018	0.561
LIG_SUMO_SIM_par_1	107	113	PF11976	0.728
LIG_SUMO_SIM_par_1	73	79	PF11976	0.629
LIG_TRAF2_1	99	102	PF00917	0.699
LIG_TYR_ITIM	47	52	PF00017	0.508
LIG_UBA3_1	74	80	PF00899	0.645
LIG_WW_3	104	108	PF00397	0.711
MOD_CK1_1	10	16	PF00069	0.552
MOD_CK1_1	79	85	PF00069	0.636
MOD_CK2_1	125	131	PF00069	0.644
MOD_GlcNHglycan	25	28	PF01048	0.308
MOD_GlcNHglycan	85	88	PF01048	0.521
MOD_GSK3_1	23	30	PF00069	0.540
MOD_GSK3_1	7	14	PF00069	0.552
MOD_GSK3_1	79	86	PF00069	0.542
MOD_N-GLC_1	10	15	PF02516	0.340
MOD_NEK2_1	7	12	PF00069	0.517
MOD_NEK2_2	27	32	PF00069	0.574
MOD_OFUCOSY	64	69	PF10250	0.662
MOD_Plk_1	10	16	PF00069	0.540
MOD_Plk_1	45	51	PF00069	0.523
MOD_ProDKin_1	79	85	PF00069	0.620
MOD_SUMO_rev_2	95	105	PF00179	0.683
TRG_ENDOCYTIC_2	118	121	PF00928	0.718
TRG_ENDOCYTIC_2	28	31	PF00928	0.469
TRG_ENDOCYTIC_2	44	47	PF00928	0.498
TRG_ENDOCYTIC_2	49	52	PF00928	0.491
TRG_Pf-PMV_PEXEL_1	107	112	PF00026	0.715

Homologs


Protein	Taxonomy	Sequence identity	Coverage
A0A0N0P5Z2	Leptomonas seymouri	86%	100%
A0A0S4J311	Bodo saltans	33%	100%
A0A0S4JKJ5	Bodo saltans	48%	76%
A0A1X0P0Y7	Trypanosomatidae	29%	100%
A0A1X0P2H6	Trypanosomatidae	53%	100%
A0A3Q8II67	Leishmania donovani	97%	100%
A4HIQ2	Leishmania braziliensis	91%	100%
A4I5Z5	Leishmania infantum	97%	100%
C9ZRC4	Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972)	53%	92%
D0A516	Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972)	32%	100%
Q4Q6X2	Leishmania major	96%	100%
V5BSJ4	Trypanosoma cruzi	55%	93%