LeishMANIAdb
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Ribonuclease

Quick info Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:
Ribonuclease
Gene product:
ribonuclease HII, putative
Species:
Leishmania mexicana
UniProt:
E9AP39_LEIMU
TriTrypDb:
LmxM.13.0050
Length:
268

Localization

Secreted promastigote
Source Evidence on protein Close homologs
Cuervo et al. no yes: 0
Hassani et al. no yes: 0
Forrest at al. (metacyclic) no yes: 0
Forrest at al. (procyclic) no yes: 0
Silverman et al. no yes: 0
Pissara et al. no yes: 0
Secreted amastigote
Source Evidence on protein Close homologs
Pires et al. no yes: 0
Exosome
Source Evidence on protein Close homologs
Silverman et al. no yes: 0
Glycosome
Source Evidence on protein Close homologs
Jamdhade et al. no yes: 0
Predictions
Source Evidence on protein Close homologs
DeepLoc
SignalP6 no yes: 0, no: 6
NetGPI no yes: 0, no: 6
Cellular components
Term Name Level Count
GO:0005737 cytoplasm 2 7
GO:0110165 cellular anatomical entity 1 7
GO:0032299 ribonuclease H2 complex 3 1
GO:0032991 protein-containing complex 1 1
GO:0140535 intracellular protein-containing complex 2 1
GO:1902494 catalytic complex 2 1

Expansion

Sequence features

E9AP39
Sequence
MSA
Disorder
Secondary
Topology
Domains
SignalP
GPI
Phosphorylations
ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: E9AP39

Function

Biological processes
Term Name Level Count
GO:0006139 nucleobase-containing compound metabolic process 3 1
GO:0006259 DNA metabolic process 4 1
GO:0006281 DNA repair 5 1
GO:0006298 mismatch repair 6 1
GO:0006401 RNA catabolic process 5 1
GO:0006725 cellular aromatic compound metabolic process 3 1
GO:0006807 nitrogen compound metabolic process 2 1
GO:0006950 response to stress 2 1
GO:0006974 DNA damage response 4 1
GO:0008152 metabolic process 1 1
GO:0009056 catabolic process 2 1
GO:0009057 macromolecule catabolic process 4 1
GO:0009987 cellular process 1 1
GO:0016070 RNA metabolic process 5 1
GO:0019439 aromatic compound catabolic process 4 1
GO:0033554 cellular response to stress 3 1
GO:0034641 cellular nitrogen compound metabolic process 3 1
GO:0034655 nucleobase-containing compound catabolic process 4 1
GO:0043137 DNA replication, removal of RNA primer 6 1
GO:0043170 macromolecule metabolic process 3 1
GO:0044237 cellular metabolic process 2 1
GO:0044238 primary metabolic process 2 1
GO:0044248 cellular catabolic process 3 1
GO:0044260 obsolete cellular macromolecule metabolic process 3 1
GO:0044265 obsolete cellular macromolecule catabolic process 4 1
GO:0044270 cellular nitrogen compound catabolic process 4 1
GO:0046483 heterocycle metabolic process 3 1
GO:0046700 heterocycle catabolic process 4 1
GO:0050896 response to stimulus 1 1
GO:0051716 cellular response to stimulus 2 1
GO:0071704 organic substance metabolic process 2 1
GO:0090304 nucleic acid metabolic process 4 1
GO:1901360 organic cyclic compound metabolic process 3 1
GO:1901361 organic cyclic compound catabolic process 4 1
GO:1901575 organic substance catabolic process 3 1
Molecular functions
Term Name Level Count
GO:0003676 nucleic acid binding 3 7
GO:0003723 RNA binding 4 7
GO:0003824 catalytic activity 1 7
GO:0004518 nuclease activity 4 7
GO:0004519 endonuclease activity 5 7
GO:0004521 RNA endonuclease activity 5 7
GO:0004523 RNA-DNA hybrid ribonuclease activity 7 7
GO:0004540 RNA nuclease activity 4 7
GO:0005488 binding 1 7
GO:0016787 hydrolase activity 2 7
GO:0016788 hydrolase activity, acting on ester bonds 3 7
GO:0016891 RNA endonuclease activity, producing 5'-phosphomonoesters 6 7
GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 6 7
GO:0043167 ion binding 2 7
GO:0043169 cation binding 3 7
GO:0046872 metal ion binding 4 7
GO:0097159 organic cyclic compound binding 2 7
GO:0140098 catalytic activity, acting on RNA 3 7
GO:0140640 catalytic activity, acting on a nucleic acid 2 7
GO:1901363 heterocyclic compound binding 2 7

Putative motif mimicry

Leishmania From To Domain/Motif Score
CLV_C14_Caspase3-7 44 48 PF00656 0.563
CLV_C14_Caspase3-7 57 61 PF00656 0.474
CLV_NRD_NRD_1 152 154 PF00675 0.609
CLV_NRD_NRD_1 157 159 PF00675 0.566
CLV_NRD_NRD_1 70 72 PF00675 0.529
CLV_PCSK_KEX2_1 159 161 PF00082 0.580
CLV_PCSK_KEX2_1 257 259 PF00082 0.688
CLV_PCSK_KEX2_1 70 72 PF00082 0.529
CLV_PCSK_PC1ET2_1 159 161 PF00082 0.580
CLV_PCSK_PC1ET2_1 257 259 PF00082 0.688
CLV_PCSK_SKI1_1 27 31 PF00082 0.563
CLV_PCSK_SKI1_1 90 94 PF00082 0.579
DEG_APCC_DBOX_1 70 78 PF00400 0.550
DEG_APCC_KENBOX_2 29 33 PF00400 0.325
DOC_CKS1_1 119 124 PF01111 0.378
DOC_MAPK_gen_1 194 204 PF00069 0.520
DOC_USP7_MATH_1 187 191 PF00917 0.520
DOC_WW_Pin1_4 118 123 PF00397 0.446
DOC_WW_Pin1_4 14 19 PF00397 0.493
DOC_WW_Pin1_4 232 237 PF00397 0.489
DOC_WW_Pin1_4 256 261 PF00397 0.663
LIG_14-3-3_CanoR_1 13 21 PF00244 0.479
LIG_14-3-3_CanoR_1 133 139 PF00244 0.466
LIG_14-3-3_CanoR_1 258 264 PF00244 0.657
LIG_BIR_II_1 1 5 PF00653 0.442
LIG_BIR_III_1 1 5 PF00653 0.442
LIG_BIR_III_3 1 5 PF00653 0.442
LIG_FHA_1 122 128 PF00498 0.534
LIG_FHA_1 172 178 PF00498 0.593
LIG_FHA_2 55 61 PF00498 0.614
LIG_LIR_Gen_1 110 119 PF02991 0.584
LIG_LIR_Gen_1 235 245 PF02991 0.593
LIG_LIR_Nem_3 164 168 PF02991 0.481
LIG_LIR_Nem_3 235 240 PF02991 0.539
LIG_LIR_Nem_3 241 245 PF02991 0.499
LIG_LYPXL_yS_3 165 168 PF13949 0.593
LIG_SH2_CRK 242 246 PF00017 0.520
LIG_SH2_NCK_1 21 25 PF00017 0.334
LIG_SH2_SRC 242 245 PF00017 0.520
LIG_SH2_STAP1 200 204 PF00017 0.505
LIG_SH2_STAT5 220 223 PF00017 0.505
LIG_SUMO_SIM_anti_2 115 121 PF11976 0.290
LIG_SUMO_SIM_anti_2 83 89 PF11976 0.456
LIG_SUMO_SIM_par_1 80 85 PF11976 0.545
LIG_TRAF2_1 140 143 PF00917 0.646
LIG_TYR_ITIM 163 168 PF00017 0.488
LIG_TYR_ITIM 19 24 PF00017 0.454
LIG_TYR_ITIM 240 245 PF00017 0.520
MOD_CDK_SPxK_1 14 20 PF00069 0.534
MOD_CDK_SPxxK_3 232 239 PF00069 0.385
MOD_CK1_1 115 121 PF00069 0.290
MOD_CK2_1 137 143 PF00069 0.615
MOD_CK2_1 45 51 PF00069 0.369
MOD_GlcNHglycan 100 103 PF01048 0.454
MOD_GlcNHglycan 114 117 PF01048 0.371
MOD_GlcNHglycan 139 142 PF01048 0.556
MOD_GlcNHglycan 14 17 PF01048 0.485
MOD_GlcNHglycan 252 255 PF01048 0.560
MOD_GlcNHglycan 47 50 PF01048 0.422
MOD_N-GLC_1 93 98 PF02516 0.451
MOD_NEK2_1 171 176 PF00069 0.563
MOD_NEK2_1 45 50 PF00069 0.528
MOD_NEK2_1 53 58 PF00069 0.539
MOD_PKA_2 12 18 PF00069 0.473
MOD_Plk_1 179 185 PF00069 0.593
MOD_Plk_1 82 88 PF00069 0.493
MOD_Plk_1 93 99 PF00069 0.366
MOD_Plk_4 115 121 PF00069 0.451
MOD_Plk_4 172 178 PF00069 0.543
MOD_Plk_4 179 185 PF00069 0.506
MOD_Plk_4 187 193 PF00069 0.465
MOD_Plk_4 200 206 PF00069 0.520
MOD_Plk_4 7 13 PF00069 0.437
MOD_Plk_4 82 88 PF00069 0.448
MOD_ProDKin_1 118 124 PF00069 0.448
MOD_ProDKin_1 14 20 PF00069 0.498
MOD_ProDKin_1 232 238 PF00069 0.489
MOD_ProDKin_1 256 262 PF00069 0.697
TRG_ENDOCYTIC_2 111 114 PF00928 0.565
TRG_ENDOCYTIC_2 165 168 PF00928 0.583
TRG_ENDOCYTIC_2 21 24 PF00928 0.553
TRG_ENDOCYTIC_2 242 245 PF00928 0.520
TRG_ER_diArg_1 144 147 PF00400 0.574
TRG_ER_diArg_1 158 161 PF00400 0.516

Homologs

Protein Taxonomy Sequence identity Coverage
A0A0N1IHU4 Leptomonas seymouri 64% 94%
A0A0S4J8A1 Bodo saltans 25% 100%
A0A3S7WSB6 Leishmania donovani 93% 100%
A0L4Z0 Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1) 29% 100%
A1B3V0 Paracoccus denitrificans (strain Pd 1222) 31% 100%
A1K6Q7 Azoarcus sp. (strain BH72) 34% 100%
A1KMP6 Mycobacterium bovis (strain BCG / Pasteur 1173P2) 28% 100%
A1T759 Mycolicibacterium vanbaalenii (strain DSM 7251 / JCM 13017 / BCRC 16820 / KCTC 9966 / NRRL B-24157 / PYR-1) 31% 100%
A1U3P0 Marinobacter nauticus (strain ATCC 700491 / DSM 11845 / VT8) 32% 100%
A2SH85 Methylibium petroleiphilum (strain ATCC BAA-1232 / LMG 22953 / PM1) 31% 100%
A3DDG7 Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) 26% 100%
A3QG89 Shewanella loihica (strain ATCC BAA-1088 / PV-4) 33% 100%
A4H713 Leishmania braziliensis 80% 100%
A4HVE1 Leishmania infantum 93% 100%
A4VJT5 Pseudomonas stutzeri (strain A1501) 30% 100%
A5FIL7 Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / NBRC 14942 / NCIMB 11054 / UW101) 26% 100%
A5U6Q7 Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) 28% 100%
A5VF46 Rhizorhabdus wittichii (strain DSM 6014 / CCUG 31198 / JCM 15750 / NBRC 105917 / EY 4224 / RW1) 33% 100%
A5WDY2 Psychrobacter sp. (strain PRwf-1) 36% 89%
A6GYW0 Flavobacterium psychrophilum (strain ATCC 49511 / DSM 21280 / CIP 103535 / JIP02/86) 29% 100%
A6V1E6 Pseudomonas aeruginosa (strain PA7) 31% 100%
A6VUT6 Marinomonas sp. (strain MWYL1) 30% 100%
A6WLC0 Shewanella baltica (strain OS185) 31% 100%
A7HQZ3 Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) 28% 100%
B0U235 Xylella fastidiosa (strain M12) 30% 100%
B1GZ18 Endomicrobium trichonymphae 29% 100%
B1IQF8 Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks) 31% 100%
B1LGY5 Escherichia coli (strain SMS-3-5 / SECEC) 31% 100%
B2I7N7 Xylella fastidiosa (strain M23) 30% 100%
B2T5I0 Paraburkholderia phytofirmans (strain DSM 17436 / LMG 22146 / PsJN) 30% 100%
B2U326 Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) 31% 100%
B3CM59 Wolbachia pipientis subsp. Culex pipiens (strain wPip) 26% 100%
B3PRG0 Rhizobium etli (strain CIAT 652) 34% 100%
B5EBC6 Citrifermentans bemidjiense (strain ATCC BAA-1014 / DSM 16622 / JCM 12645 / Bem) 31% 100%
B5Z0G2 Escherichia coli O157:H7 (strain EC4115 / EHEC) 31% 100%
B5ZS20 Rhizobium leguminosarum bv. trifolii (strain WSM2304) 34% 100%
B7LW62 Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73) 31% 100%
B7MP43 Escherichia coli O81 (strain ED1a) 31% 100%
B7N850 Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) 31% 100%
B7NIE5 Escherichia coli O7:K1 (strain IAI39 / ExPEC) 31% 100%
B7UJ84 Escherichia coli O127:H6 (strain E2348/69 / EPEC) 31% 100%
B7V7U6 Pseudomonas aeruginosa (strain LESB58) 31% 100%
B8E7Q2 Shewanella baltica (strain OS223) 31% 100%
B8GQ66 Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) 31% 100%
B9M597 Geotalea daltonii (strain DSM 22248 / JCM 15807 / FRC-32) 35% 100%
C1AG17 Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) 28% 100%
P9WH00 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) 28% 100%
P9WH01 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) 28% 100%
Q02RB4 Pseudomonas aeruginosa (strain UCBPP-PA14) 31% 100%
Q0A7J3 Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) 33% 100%
Q0AEI5 Nitrosomonas eutropha (strain DSM 101675 / C91 / Nm57) 27% 100%
Q0BYK9 Hyphomonas neptunium (strain ATCC 15444) 31% 100%
Q0TLF0 Escherichia coli O6:K15:H31 (strain 536 / UPEC) 31% 100%
Q12A45 Polaromonas sp. (strain JS666 / ATCC BAA-500) 28% 100%
Q13XD0 Paraburkholderia xenovorans (strain LB400) 30% 100%
Q18BC9 Clostridioides difficile (strain 630) 26% 100%
Q1MKS7 Rhizobium leguminosarum bv. viciae (strain 3841) 35% 100%
Q1QAL9 Psychrobacter cryohalolentis (strain ATCC BAA-1226 / DSM 17306 / VKM B-2378 / K5) 34% 94%
Q21HI6 Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) 31% 100%
Q21WX6 Albidiferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) 29% 100%
Q2GFP8 Ehrlichia chaffeensis (strain ATCC CRL-10679 / Arkansas) 27% 100%
Q2KBV7 Rhizobium etli (strain CFN 42 / ATCC 51251) 35% 100%
Q325V7 Shigella boydii serotype 4 (strain Sb227) 31% 100%
Q3YST1 Ehrlichia canis (strain Jake) 26% 100%
Q470F1 Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) 28% 100%
Q48F73 Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) 34% 100%
Q4FPF7 Pelagibacter ubique (strain HTCC1062) 27% 100%
Q4FT93 Psychrobacter arcticus (strain DSM 17307 / VKM B-2377 / 273-4) 35% 93%
Q4QGE9 Leishmania major 91% 100%
Q5LIL2 Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) 32% 100%
Q5NZG1 Aromatoleum aromaticum (strain EbN1) 32% 100%
Q5WFP1 Alkalihalobacillus clausii (strain KSM-K16) 33% 100%
Q64ZN7 Bacteroides fragilis (strain YCH46) 32% 100%
Q6MLA0 Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIMB 9529 / HD100) 29% 100%
Q73G60 Wolbachia pipientis wMel 26% 100%
Q7NPS3 Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) 34% 100%
Q82U06 Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298) 32% 100%
Q87EI6 Xylella fastidiosa (strain Temecula1 / ATCC 700964) 30% 100%
Q886M9 Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) 34% 100%
Q8A293 Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) 31% 100%
Q8FL06 Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) 31% 100%
Q8PML9 Xanthomonas axonopodis pv. citri (strain 306) 33% 100%
Q8X8X6 Escherichia coli O157:H7 31% 100%
Q9HXY9 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 31% 100%
Q9PEI7 Xylella fastidiosa (strain 9a5c) 30% 100%
Q9Z962 Chlamydia pneumoniae 28% 100%

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LeishMANIAdb - Server version: v0.0.2. - Database version: v0.0.1. - ChangeLog - © 2022-2025 Protein Bioinformatics Research Group, Institute of Enzymology, RCNS