LeishMANIAdb
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Polyadenylate-binding protein

Quick info Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:
Polyadenylate-binding protein
Gene product:
polyadenylate-binding protein 2
Species:
Leishmania major
UniProt:
E9AFP0_LEIMA
TriTrypDb:
LmjF.35.4130 , LMJLV39_350049300 * , LMJSD75_350048700
Length:
594

Localization

Secreted promastigote
Source Evidence on protein Close homologs
Cuervo et al. no yes: 0
Hassani et al. no yes: 0
Forrest at al. (metacyclic) no yes: 0
Forrest at al. (procyclic) no yes: 6
Silverman et al. no yes: 0
Pissara et al. yes yes: 20
Secreted amastigote
Source Evidence on protein Close homologs
Pires et al. no yes: 0
Exosome
Source Evidence on protein Close homologs
Silverman et al. no yes: 0
Glycosome
Source Evidence on protein Close homologs
Jamdhade et al. no yes: 14
Predictions
Source Evidence on protein Close homologs
DeepLoc
SignalP6 no yes: 0, no: 11
NetGPI no yes: 0, no: 11
Cellular components
Term Name Level Count
GO:0000932 P-body 5 2
GO:0005634 nucleus 5 2
GO:0005737 cytoplasm 2 12
GO:0005829 cytosol 2 2
GO:0010494 cytoplasmic stress granule 5 2
GO:0032991 protein-containing complex 1 2
GO:0035770 ribonucleoprotein granule 3 2
GO:0036464 cytoplasmic ribonucleoprotein granule 4 2
GO:0043226 organelle 2 2
GO:0043227 membrane-bounded organelle 3 2
GO:0043228 non-membrane-bounded organelle 3 2
GO:0043229 intracellular organelle 3 2
GO:0043231 intracellular membrane-bounded organelle 4 2
GO:0043232 intracellular non-membrane-bounded organelle 4 2
GO:0097165 nuclear stress granule 4 2
GO:0099080 supramolecular complex 2 2
GO:0110165 cellular anatomical entity 1 12
GO:1990904 ribonucleoprotein complex 2 2

Expansion

Sequence features

E9AFP0
Sequence
MSA
Disorder
Secondary
Topology
Domains
SignalP
GPI
Phosphorylations
ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: E9AFP0

Function

Biological processes
Term Name Level Count
GO:0006139 nucleobase-containing compound metabolic process 3 2
GO:0006396 RNA processing 6 2
GO:0006725 cellular aromatic compound metabolic process 3 2
GO:0006807 nitrogen compound metabolic process 2 2
GO:0008152 metabolic process 1 2
GO:0009987 cellular process 1 2
GO:0016070 RNA metabolic process 5 2
GO:0034641 cellular nitrogen compound metabolic process 3 2
GO:0043170 macromolecule metabolic process 3 2
GO:0044237 cellular metabolic process 2 2
GO:0044238 primary metabolic process 2 2
GO:0046483 heterocycle metabolic process 3 2
GO:0071704 organic substance metabolic process 2 2
GO:0090304 nucleic acid metabolic process 4 2
GO:1901360 organic cyclic compound metabolic process 3 2
Molecular functions
Term Name Level Count
GO:0003676 nucleic acid binding 3 12
GO:0003723 RNA binding 4 12
GO:0003727 single-stranded RNA binding 5 2
GO:0003729 mRNA binding 5 2
GO:0003730 mRNA 3'-UTR binding 6 2
GO:0005488 binding 1 12
GO:0005515 protein binding 2 2
GO:0008143 poly(A) binding 7 2
GO:0008187 poly-pyrimidine tract binding 6 2
GO:0008266 poly(U) RNA binding 7 2
GO:0031369 translation initiation factor binding 3 2
GO:0031370 eukaryotic initiation factor 4G binding 4 2
GO:0070717 poly-purine tract binding 6 2
GO:0097159 organic cyclic compound binding 2 12
GO:1901363 heterocyclic compound binding 2 12

Putative motif mimicry

Leishmania From To Domain/Motif Score
CLV_C14_Caspase3-7 147 151 PF00656 0.548
CLV_C14_Caspase3-7 575 579 PF00656 0.551
CLV_NRD_NRD_1 277 279 PF00675 0.541
CLV_NRD_NRD_1 366 368 PF00675 0.509
CLV_NRD_NRD_1 371 373 PF00675 0.509
CLV_NRD_NRD_1 90 92 PF00675 0.498
CLV_PCSK_FUR_1 275 279 PF00082 0.532
CLV_PCSK_KEX2_1 277 279 PF00082 0.539
CLV_PCSK_KEX2_1 371 373 PF00082 0.517
CLV_PCSK_KEX2_1 89 91 PF00082 0.500
CLV_PCSK_PC1ET2_1 89 91 PF00082 0.515
CLV_PCSK_PC7_1 273 279 PF00082 0.535
CLV_PCSK_PC7_1 367 373 PF00082 0.524
CLV_PCSK_PC7_1 85 91 PF00082 0.511
CLV_PCSK_SKI1_1 112 116 PF00082 0.262
CLV_PCSK_SKI1_1 180 184 PF00082 0.479
CLV_PCSK_SKI1_1 200 204 PF00082 0.310
CLV_PCSK_SKI1_1 358 362 PF00082 0.414
CLV_PCSK_SKI1_1 533 537 PF00082 0.262
CLV_PCSK_SKI1_1 79 83 PF00082 0.428
DOC_ANK_TNKS_1 119 126 PF00023 0.473
DOC_MAPK_gen_1 117 126 PF00069 0.462
DOC_MAPK_HePTP_8 307 319 PF00069 0.487
DOC_MAPK_MEF2A_6 310 319 PF00069 0.473
DOC_MAPK_MEF2A_6 554 562 PF00069 0.462
DOC_PP1_RVXF_1 137 143 PF00149 0.527
DOC_PP2B_PxIxI_1 7 13 PF00149 0.321
DOC_PP4_FxxP_1 3 6 PF00568 0.662
DOC_PP4_FxxP_1 354 357 PF00568 0.540
DOC_PP4_FxxP_1 402 405 PF00568 0.590
DOC_PP4_FxxP_1 415 418 PF00568 0.582
DOC_PP4_FxxP_1 56 59 PF00568 0.462
DOC_USP7_MATH_1 219 223 PF00917 0.578
DOC_USP7_MATH_1 33 37 PF00917 0.462
DOC_USP7_MATH_1 501 505 PF00917 0.708
DOC_USP7_MATH_1 6 10 PF00917 0.446
DOC_USP7_UBL2_3 100 104 PF12436 0.558
DOC_WW_Pin1_4 253 258 PF00397 0.468
DOC_WW_Pin1_4 353 358 PF00397 0.651
DOC_WW_Pin1_4 570 575 PF00397 0.505
LIG_14-3-3_CanoR_1 120 126 PF00244 0.475
LIG_14-3-3_CanoR_1 139 143 PF00244 0.473
LIG_14-3-3_CanoR_1 539 544 PF00244 0.558
LIG_14-3-3_CterR_2 590 594 PF00244 0.624
LIG_BIR_II_1 1 5 PF00653 0.570
LIG_BRCT_BRCA1_1 327 331 PF00533 0.462
LIG_BRCT_BRCA1_1 378 382 PF00533 0.679
LIG_Clathr_ClatBox_1 559 563 PF01394 0.462
LIG_EVH1_2 398 402 PF00568 0.699
LIG_FHA_1 106 112 PF00498 0.473
LIG_FHA_1 312 318 PF00498 0.467
LIG_FHA_1 361 367 PF00498 0.455
LIG_FHA_1 554 560 PF00498 0.471
LIG_FHA_2 573 579 PF00498 0.500
LIG_GBD_Chelix_1 551 559 PF00786 0.358
LIG_LIR_Apic_2 352 357 PF02991 0.625
LIG_LIR_Gen_1 113 123 PF02991 0.527
LIG_LIR_Gen_1 134 142 PF02991 0.484
LIG_LIR_Gen_1 26 34 PF02991 0.473
LIG_LIR_Gen_1 538 549 PF02991 0.462
LIG_LIR_Gen_1 75 83 PF02991 0.626
LIG_LIR_Nem_3 113 118 PF02991 0.472
LIG_LIR_Nem_3 134 140 PF02991 0.475
LIG_LIR_Nem_3 26 31 PF02991 0.473
LIG_LIR_Nem_3 285 290 PF02991 0.448
LIG_LIR_Nem_3 305 311 PF02991 0.353
LIG_LIR_Nem_3 328 334 PF02991 0.471
LIG_LIR_Nem_3 48 54 PF02991 0.471
LIG_LIR_Nem_3 538 544 PF02991 0.462
LIG_LIR_Nem_3 75 80 PF02991 0.542
LIG_LYPXL_yS_3 287 290 PF13949 0.417
LIG_REV1ctd_RIR_1 200 209 PF16727 0.527
LIG_SH2_CRK 137 141 PF00017 0.502
LIG_SH2_CRK 51 55 PF00017 0.474
LIG_SH2_CRK 541 545 PF00017 0.487
LIG_SH2_GRB2like 53 56 PF00017 0.462
LIG_SH2_NCK_1 137 141 PF00017 0.473
LIG_SH2_STAP1 25 29 PF00017 0.462
LIG_SH2_STAP1 541 545 PF00017 0.558
LIG_SH2_STAT3 170 173 PF00017 0.603
LIG_SH2_STAT5 186 189 PF00017 0.491
LIG_SH2_STAT5 228 231 PF00017 0.462
LIG_SH2_STAT5 27 30 PF00017 0.563
LIG_SH2_STAT5 291 294 PF00017 0.462
LIG_SH2_STAT5 53 56 PF00017 0.462
LIG_SH2_STAT5 543 546 PF00017 0.499
LIG_SH2_STAT5 77 80 PF00017 0.619
LIG_SH3_1 494 500 PF00018 0.693
LIG_SH3_3 408 414 PF00018 0.655
LIG_SH3_3 415 421 PF00018 0.624
LIG_SH3_3 479 485 PF00018 0.617
LIG_SH3_3 494 500 PF00018 0.675
LIG_SH3_4 499 506 PF00018 0.780
LIG_SUMO_SIM_anti_2 316 322 PF11976 0.491
LIG_SUMO_SIM_par_1 256 261 PF11976 0.550
LIG_SUMO_SIM_par_1 313 318 PF11976 0.487
LIG_TRAF2_1 240 243 PF00917 0.465
LIG_TRAF2_1 265 268 PF00917 0.570
LIG_TRAF2_1 345 348 PF00917 0.473
LIG_TYR_ITIM 49 54 PF00017 0.462
MOD_CDK_SPK_2 353 358 PF00069 0.651
MOD_CK1_1 105 111 PF00069 0.488
MOD_CK1_1 547 553 PF00069 0.546
MOD_CK2_1 262 268 PF00069 0.508
MOD_GlcNHglycan 145 149 PF01048 0.262
MOD_GlcNHglycan 210 213 PF01048 0.288
MOD_GlcNHglycan 42 45 PF01048 0.358
MOD_GlcNHglycan 91 94 PF01048 0.475
MOD_GSK3_1 258 265 PF00069 0.590
MOD_GSK3_1 311 318 PF00069 0.502
MOD_GSK3_1 349 356 PF00069 0.548
MOD_GSK3_1 486 493 PF00069 0.773
MOD_GSK3_1 572 579 PF00069 0.557
MOD_GSK3_1 68 75 PF00069 0.521
MOD_GSK3_1 85 92 PF00069 0.430
MOD_N-GLC_1 349 354 PF02516 0.358
MOD_NEK2_1 1 6 PF00069 0.676
MOD_NEK2_1 258 263 PF00069 0.444
MOD_NEK2_1 295 300 PF00069 0.469
MOD_NEK2_1 349 354 PF00069 0.467
MOD_NEK2_1 360 365 PF00069 0.409
MOD_NEK2_1 576 581 PF00069 0.532
MOD_NEK2_2 33 38 PF00069 0.462
MOD_NEK2_2 332 337 PF00069 0.462
MOD_PIKK_1 340 346 PF00454 0.546
MOD_PIKK_1 42 48 PF00454 0.473
MOD_PIKK_1 486 492 PF00454 0.764
MOD_PKA_1 89 95 PF00069 0.489
MOD_PKA_2 119 125 PF00069 0.475
MOD_PKA_2 138 144 PF00069 0.473
MOD_PKA_2 89 95 PF00069 0.473
MOD_Plk_1 144 150 PF00069 0.467
MOD_Plk_1 258 264 PF00069 0.563
MOD_Plk_1 295 301 PF00069 0.473
MOD_Plk_2-3 572 578 PF00069 0.556
MOD_Plk_4 315 321 PF00069 0.490
MOD_Plk_4 350 356 PF00069 0.487
MOD_Plk_4 501 507 PF00069 0.709
MOD_Plk_4 539 545 PF00069 0.546
MOD_Plk_4 572 578 PF00069 0.556
MOD_Plk_4 6 12 PF00069 0.420
MOD_ProDKin_1 253 259 PF00069 0.463
MOD_ProDKin_1 353 359 PF00069 0.651
MOD_ProDKin_1 570 576 PF00069 0.505
MOD_SUMO_rev_2 16 24 PF00179 0.456
MOD_SUMO_rev_2 191 199 PF00179 0.487
MOD_SUMO_rev_2 572 582 PF00179 0.462
TRG_ENDOCYTIC_2 137 140 PF00928 0.502
TRG_ENDOCYTIC_2 206 209 PF00928 0.546
TRG_ENDOCYTIC_2 228 231 PF00928 0.527
TRG_ENDOCYTIC_2 25 28 PF00928 0.462
TRG_ENDOCYTIC_2 287 290 PF00928 0.417
TRG_ENDOCYTIC_2 51 54 PF00928 0.474
TRG_ENDOCYTIC_2 541 544 PF00928 0.462
TRG_ENDOCYTIC_2 77 80 PF00928 0.654
TRG_ER_diArg_1 263 266 PF00400 0.510
TRG_ER_diArg_1 275 278 PF00400 0.558
TRG_ER_diArg_1 382 385 PF00400 0.578
TRG_ER_diArg_1 491 494 PF00400 0.655
TRG_NES_CRM1_1 176 191 PF08389 0.496
TRG_NLS_MonoExtN_4 87 93 PF00514 0.501

Homologs

Protein Taxonomy Sequence identity Coverage
A0A0N0P5A9 Leptomonas seymouri 90% 100%
A0A0S4IKZ4 Bodo saltans 57% 100%
A0A0S4JPT3 Bodo saltans 38% 100%
A0A1X0P4T3 Trypanosomatidae 37% 100%
A0A1X0P525 Trypanosomatidae 66% 100%
A0A3Q8IF40 Leishmania donovani 37% 100%
A0A3Q8IGR8 Leishmania donovani 36% 100%
A0A3Q8IMW2 Leishmania donovani 99% 100%
A0A3R7NAH9 Trypanosoma rangeli 36% 100%
A0A422NK82 Trypanosoma rangeli 66% 100%
A1CRM1 Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) 32% 79%
A1D4K4 Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) 33% 79%
A2Q848 Aspergillus niger (strain CBS 513.88 / FGSC A1513) 33% 81%
A3LXL0 Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) 34% 94%
A4HDV5 Leishmania braziliensis 37% 100%
A4HN85 Leishmania braziliensis 91% 100%
A4HNG6 Leishmania braziliensis 37% 100%
A4I150 Leishmania infantum 36% 100%
A4IBV3 Leishmania infantum 99% 100%
A4IC57 Leishmania infantum 36% 100%
A4QUF0 Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) 35% 78%
A5DM21 Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) 34% 94%
A5DW14 Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) 36% 90%
C9ZYQ8 Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972) 66% 100%
E9AFX7 Leishmania major 36% 100%
E9AX84 Leishmania mexicana (strain MHOM/GT/2001/U1103) 37% 100%
E9B6U3 Leishmania mexicana (strain MHOM/GT/2001/U1103) 98% 100%
E9B730 Leishmania mexicana (strain MHOM/GT/2001/U1103) 36% 100%
F1QB54 Danio rerio 40% 94%
O22173 Arabidopsis thaliana 37% 90%
O64380 Arabidopsis thaliana 39% 90%
P04147 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) 39% 100%
P0CP46 Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) 36% 88%
P0CP47 Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) 36% 88%
P11940 Homo sapiens 40% 93%
P20965 Xenopus laevis 40% 94%
P29341 Mus musculus 40% 93%
P31209 Schizosaccharomyces pombe (strain 972 / ATCC 24843) 35% 91%
P42731 Arabidopsis thaliana 38% 94%
P61286 Bos taurus 40% 93%
Q05196 Arabidopsis thaliana 36% 87%
Q0CR95 Aspergillus terreus (strain NIH 2624 / FGSC A1156) 32% 79%
Q0U1G2 Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) 32% 80%
Q13310 Homo sapiens 40% 92%
Q1DXH0 Coccidioides immitis (strain RS) 34% 77%
Q1ZXC2 Dictyostelium discoideum 30% 73%
Q2GSX8 Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) 34% 76%
Q2UK72 Aspergillus oryzae (strain ATCC 42149 / RIB 40) 33% 78%
Q4QA88 Leishmania major 36% 100%
Q4VXU2 Homo sapiens 38% 97%
Q4WK03 Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) 33% 79%
Q54BM2 Dictyostelium discoideum 32% 100%
Q5AI15 Candida albicans (strain SC5314 / ATCC MYA-2876) 36% 94%
Q5B630 Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) 35% 81%
Q5R8F7 Pongo abelii 40% 93%
Q6BI95 Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) 34% 95%
Q6CDH3 Yarrowia lipolytica (strain CLIB 122 / E 150) 32% 94%
Q6CSV3 Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) 33% 100%
Q6DEY7 Xenopus tropicalis 38% 94%
Q6FKG4 Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) 32% 100%
Q6GR16 Xenopus laevis 38% 94%
Q6IP09 Xenopus laevis 39% 94%
Q74ZS6 Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) 38% 100%
Q7S6N6 Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) 34% 78%
Q8SR30 Encephalitozoon cuniculi (strain GB-M1) 25% 100%
Q98SP8 Xenopus laevis 38% 94%
Q9EPH8 Rattus norvegicus 40% 93%
Q9FXA2 Arabidopsis thaliana 37% 89%
Q9ZQA8 Arabidopsis thaliana 31% 98%
V5BYR2 Trypanosoma cruzi 36% 100%
V5DUJ1 Trypanosoma cruzi 66% 100%

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LeishMANIAdb - Server version: v0.0.2. - Database version: v0.0.1. - ChangeLog - © 2022-2025 Protein Bioinformatics Research Group, Institute of Enzymology, RCNS