RNA Processing, Splicing factor 3B subunit 10 (SF3b10), putative
| Source | Evidence on protein | Close homologs |
|---|---|---|
| Cuervo et al. | no | yes: 0 |
| Hassani et al. | no | yes: 0 |
| Forrest at al. (metacyclic) | no | yes: 0 |
| Forrest at al. (procyclic) | no | yes: 0 |
| Silverman et al. | no | yes: 0 |
| Pissara et al. | no | yes: 0 |
| Source | Evidence on protein | Close homologs |
|---|---|---|
| Pires et al. | no | yes: 0 |
| Source | Evidence on protein | Close homologs |
|---|---|---|
| Silverman et al. | no | yes: 0 |
| Source | Evidence on protein | Close homologs |
|---|---|---|
| Jamdhade et al. | no | yes: 0 |
| Source | Evidence on protein | Close homologs |
|---|---|---|
| DeepLoc | ||
| SignalP6 | no | yes: 0, no: 8 |
| NetGPI | no | yes: 0, no: 8 |
| Term | Name | Level | Count |
|---|---|---|---|
| GO:0005681 | spliceosomal complex | 3 | 1 |
| GO:0005686 | U2 snRNP | 5 | 1 |
| GO:0030532 | small nuclear ribonucleoprotein complex | 3 | 1 |
| GO:0032991 | protein-containing complex | 1 | 1 |
| GO:0071011 | precatalytic spliceosome | 4 | 1 |
| GO:0097525 | spliceosomal snRNP complex | 4 | 1 |
| GO:0120114 | Sm-like protein family complex | 2 | 1 |
| GO:0140513 | nuclear protein-containing complex | 2 | 1 |
| GO:1990904 | ribonucleoprotein complex | 2 | 1 |
Related structures:
AlphaFold database: A4IBU8
| Term | Name | Level | Count |
|---|---|---|---|
| GO:0000375 | RNA splicing, via transesterification reactions | 8 | 1 |
| GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | 9 | 1 |
| GO:0000398 | mRNA splicing, via spliceosome | 8 | 1 |
| GO:0006139 | nucleobase-containing compound metabolic process | 3 | 1 |
| GO:0006396 | RNA processing | 6 | 1 |
| GO:0006397 | mRNA processing | 7 | 1 |
| GO:0006725 | cellular aromatic compound metabolic process | 3 | 1 |
| GO:0006807 | nitrogen compound metabolic process | 2 | 1 |
| GO:0008152 | metabolic process | 1 | 1 |
| GO:0008380 | RNA splicing | 7 | 1 |
| GO:0009987 | cellular process | 1 | 1 |
| GO:0016070 | RNA metabolic process | 5 | 1 |
| GO:0016071 | mRNA metabolic process | 6 | 1 |
| GO:0034641 | cellular nitrogen compound metabolic process | 3 | 1 |
| GO:0043170 | macromolecule metabolic process | 3 | 1 |
| GO:0044237 | cellular metabolic process | 2 | 1 |
| GO:0044238 | primary metabolic process | 2 | 1 |
| GO:0046483 | heterocycle metabolic process | 3 | 1 |
| GO:0071704 | organic substance metabolic process | 2 | 1 |
| GO:0090304 | nucleic acid metabolic process | 4 | 1 |
| GO:1901360 | organic cyclic compound metabolic process | 3 | 1 |
| Leishmania | From | To | Domain/Motif | Score |
|---|---|---|---|---|
| CLV_PCSK_SKI1_1 | 71 | 75 | PF00082 | 0.257 |
| DEG_APCC_DBOX_1 | 41 | 49 | PF00400 | 0.315 |
| DEG_APCC_DBOX_1 | 51 | 59 | PF00400 | 0.255 |
| DEG_APCC_DBOX_1 | 70 | 78 | PF00400 | 0.290 |
| DOC_CYCLIN_RxL_1 | 68 | 75 | PF00134 | 0.260 |
| DOC_PP4_FxxP_1 | 5 | 8 | PF00568 | 0.482 |
| LIG_AP2alpha_2 | 3 | 5 | PF02296 | 0.475 |
| LIG_FHA_1 | 24 | 30 | PF00498 | 0.290 |
| LIG_FHA_2 | 29 | 35 | PF00498 | 0.258 |
| LIG_FHA_2 | 45 | 51 | PF00498 | 0.243 |
| LIG_LIR_Apic_2 | 3 | 8 | PF02991 | 0.477 |
| LIG_LIR_Gen_1 | 56 | 65 | PF02991 | 0.258 |
| LIG_LIR_Nem_3 | 34 | 39 | PF02991 | 0.290 |
| LIG_LIR_Nem_3 | 56 | 60 | PF02991 | 0.258 |
| LIG_NRP_CendR_1 | 83 | 84 | PF00754 | 0.548 |
| LIG_SH2_SRC | 12 | 15 | PF00017 | 0.427 |
| LIG_SH2_STAT5 | 57 | 60 | PF00017 | 0.290 |
| LIG_TYR_ITIM | 55 | 60 | PF00017 | 0.255 |
| MOD_CK2_1 | 44 | 50 | PF00069 | 0.369 |
| MOD_GSK3_1 | 25 | 32 | PF00069 | 0.297 |
| MOD_PKA_2 | 41 | 47 | PF00069 | 0.255 |
| MOD_Plk_4 | 44 | 50 | PF00069 | 0.222 |
| MOD_SUMO_for_1 | 21 | 24 | PF00179 | 0.255 |
| MOD_SUMO_for_1 | 67 | 70 | PF00179 | 0.349 |
| TRG_ENDOCYTIC_2 | 57 | 60 | PF00928 | 0.255 |
| TRG_Pf-PMV_PEXEL_1 | 71 | 75 | PF00026 | 0.255 |
| Protein | Taxonomy | Sequence identity | Coverage |
|---|---|---|---|
| A0A0N1I2K0 | Leptomonas seymouri | 89% | 100% |
| A0A0S4IXB6 | Bodo saltans | 56% | 83% |
| A0A3S5H805 | Leishmania donovani | 100% | 100% |
| A4HN80 | Leishmania braziliensis | 95% | 100% |
| C9ZYR3 | Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972) | 74% | 94% |
| E9AFN5 | Leishmania major | 98% | 100% |
| E9B6T8 | Leishmania mexicana (strain MHOM/GT/2001/U1103) | 96% | 100% |
| Q56K13 | Bos taurus | 36% | 98% |
| Q923D4 | Mus musculus | 37% | 98% |
| Q9BWJ5 | Homo sapiens | 36% | 98% |
| Q9P7R6 | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | 36% | 99% |
| Q9VHI4 | Drosophila melanogaster | 40% | 99% |