Nucleic acid binding, small nuclear ribonucleo polypeptide e
| Source | Evidence on protein | Close homologs |
|---|---|---|
| Cuervo et al. | no | yes: 0 |
| Hassani et al. | no | yes: 0 |
| Forrest at al. (metacyclic) | no | yes: 0 |
| Forrest at al. (procyclic) | no | yes: 0 |
| Silverman et al. | no | yes: 0 |
| Pissara et al. | yes | yes: 25 |
| Source | Evidence on protein | Close homologs |
|---|---|---|
| Pires et al. | no | yes: 0 |
| Source | Evidence on protein | Close homologs |
|---|---|---|
| Silverman et al. | no | yes: 0 |
| Source | Evidence on protein | Close homologs |
|---|---|---|
| Jamdhade et al. | no | yes: 0 |
| Source | Evidence on protein | Close homologs |
|---|---|---|
| DeepLoc | ||
| SignalP6 | no | yes: 0, no: 8 |
| NetGPI | no | yes: 0, no: 8 |
| Term | Name | Level | Count |
|---|---|---|---|
| GO:0005681 | spliceosomal complex | 3 | 9 |
| GO:0005682 | U5 snRNP | 5 | 9 |
| GO:0005685 | U1 snRNP | 5 | 9 |
| GO:0005686 | U2 snRNP | 5 | 9 |
| GO:0005687 | U4 snRNP | 5 | 9 |
| GO:0005737 | cytoplasm | 2 | 9 |
| GO:0030532 | small nuclear ribonucleoprotein complex | 3 | 9 |
| GO:0032991 | protein-containing complex | 1 | 9 |
| GO:0046540 | U4/U6 x U5 tri-snRNP complex | 6 | 9 |
| GO:0097525 | spliceosomal snRNP complex | 4 | 9 |
| GO:0097526 | spliceosomal tri-snRNP complex | 5 | 9 |
| GO:0110165 | cellular anatomical entity | 1 | 9 |
| GO:0120114 | Sm-like protein family complex | 2 | 9 |
| GO:0140513 | nuclear protein-containing complex | 2 | 9 |
| GO:1990904 | ribonucleoprotein complex | 2 | 9 |
| GO:0071011 | precatalytic spliceosome | 4 | 1 |
| Source | Evidence on protein | Close homologs |
|---|---|---|
| Pescher et al. (upgregulation) | no | yes: 0 |
| Source | Evidence on protein | Close homologs |
|---|---|---|
|
Lahav et al. - mRNA
- Protein
|
Related structures:
AlphaFold database: A4I5F2
| Term | Name | Level | Count |
|---|---|---|---|
| GO:0000387 | spliceosomal snRNP assembly | 7 | 9 |
| GO:0009987 | cellular process | 1 | 9 |
| GO:0016043 | cellular component organization | 3 | 9 |
| GO:0022607 | cellular component assembly | 4 | 9 |
| GO:0022618 | ribonucleoprotein complex assembly | 6 | 9 |
| GO:0043933 | protein-containing complex organization | 4 | 9 |
| GO:0065003 | protein-containing complex assembly | 5 | 9 |
| GO:0071826 | ribonucleoprotein complex subunit organization | 5 | 9 |
| GO:0071840 | cellular component organization or biogenesis | 2 | 9 |
| Term | Name | Level | Count |
|---|---|---|---|
| GO:0003676 | nucleic acid binding | 3 | 9 |
| GO:0003723 | RNA binding | 4 | 9 |
| GO:0005488 | binding | 1 | 9 |
| GO:0097159 | organic cyclic compound binding | 2 | 9 |
| GO:1901363 | heterocyclic compound binding | 2 | 9 |
| Leishmania | From | To | Domain/Motif | Score |
|---|---|---|---|---|
| CLV_PCSK_SKI1_1 | 70 | 74 | PF00082 | 0.242 |
| DOC_CYCLIN_RxL_1 | 64 | 76 | PF00134 | 0.447 |
| DOC_MAPK_gen_1 | 64 | 73 | PF00069 | 0.498 |
| LIG_14-3-3_CanoR_1 | 61 | 67 | PF00244 | 0.488 |
| LIG_BIR_II_1 | 1 | 5 | PF00653 | 0.600 |
| LIG_FHA_1 | 10 | 16 | PF00498 | 0.423 |
| LIG_LIR_Gen_1 | 45 | 52 | PF02991 | 0.442 |
| LIG_LIR_Nem_3 | 45 | 50 | PF02991 | 0.453 |
| LIG_PDZ_Class_2 | 81 | 86 | PF00595 | 0.514 |
| LIG_SH2_STAP1 | 44 | 48 | PF00017 | 0.442 |
| LIG_SH3_3 | 27 | 33 | PF00018 | 0.483 |
| LIG_SH3_3 | 77 | 83 | PF00018 | 0.466 |
| MOD_CK1_1 | 2 | 8 | PF00069 | 0.612 |
| MOD_GlcNHglycan | 1 | 4 | PF01048 | 0.630 |
| MOD_N-GLC_1 | 62 | 67 | PF02516 | 0.213 |
| MOD_Plk_1 | 62 | 68 | PF00069 | 0.413 |
| TRG_ENDOCYTIC_2 | 44 | 47 | PF00928 | 0.426 |
| Protein | Taxonomy | Sequence identity | Coverage |
|---|---|---|---|
| A0A0N1PE83 | Leptomonas seymouri | 86% | 100% |
| A0A0S4KHT0 | Bodo saltans | 41% | 99% |
| A0A3Q8IEV2 | Leishmania donovani | 99% | 100% |
| A1XQR9 | Sus scrofa | 35% | 93% |
| A4FUI2 | Bos taurus | 35% | 93% |
| A4HI73 | Leishmania braziliensis | 88% | 100% |
| A8XDT0 | Caenorhabditis briggsae | 39% | 96% |
| C9ZQT9 | Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972) | 66% | 100% |
| E9B0Q0 | Leishmania mexicana (strain MHOM/GT/2001/U1103) | 98% | 100% |
| P62303 | Gallus gallus | 35% | 93% |
| P62304 | Homo sapiens | 35% | 93% |
| P62305 | Mus musculus | 35% | 93% |
| Q12330 | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) | 34% | 91% |
| Q4Q7I2 | Leishmania major | 98% | 100% |
| Q7ZUG0 | Danio rerio | 35% | 93% |
| Q9USZ3 | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | 39% | 100% |
| Q9VLV5 | Drosophila melanogaster | 38% | 91% |
| Q9XTU6 | Caenorhabditis elegans | 39% | 96% |