LeishMANIAdb
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Tryptophan--tRNA ligase

Quick info Annotations Function or PPIs Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:
Tryptophan--tRNA ligase
Gene product:
tryptophanyl-tRNA synthetase - putative
Species:
Leishmania infantum
UniProt:
A4I443_LEIIN
TriTrypDb:
LINF_290005500
Length:
396

Annotations

Annotations by Jardim et al.

tRNA synthetase, tryptophanyl-tRNA synthetase

Localization

Secreted promastigote
Source Evidence on protein Close homologs
Cuervo et al. no yes: 0
Hassani et al. no yes: 0
Forrest at al. (metacyclic) no yes: 0
Forrest at al. (procyclic) yes yes: 3
Silverman et al. no yes: 0
Pissara et al. no yes: 0
Secreted amastigote
Source Evidence on protein Close homologs
Pires et al. no yes: 0
Exosome
Source Evidence on protein Close homologs
Silverman et al. no yes: 0
Glycosome
Source Evidence on protein Close homologs
Jamdhade et al. no yes: 8
Predictions
Source Evidence on protein Close homologs
DeepLoc
SignalP6 no yes: 0, no: 11
NetGPI no yes: 0, no: 11
Cellular components
Term Name Level Count
GO:0005737 cytoplasm 2 1
GO:0110165 cellular anatomical entity 1 1

Expansion

Sequence features

A4I443
Sequence
MSA
Disorder
Secondary
Topology
Domains
SignalP
GPI
Phosphorylations
ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: A4I443

Function

Biological processes
Term Name Level Count
GO:0006082 organic acid metabolic process 3 12
GO:0006139 nucleobase-containing compound metabolic process 3 12
GO:0006399 tRNA metabolic process 7 12
GO:0006418 tRNA aminoacylation for protein translation 6 12
GO:0006436 tryptophanyl-tRNA aminoacylation 7 12
GO:0006520 amino acid metabolic process 3 12
GO:0006725 cellular aromatic compound metabolic process 3 12
GO:0006807 nitrogen compound metabolic process 2 12
GO:0008152 metabolic process 1 12
GO:0009987 cellular process 1 12
GO:0016070 RNA metabolic process 5 12
GO:0019752 carboxylic acid metabolic process 5 12
GO:0034641 cellular nitrogen compound metabolic process 3 12
GO:0034660 ncRNA metabolic process 6 12
GO:0043038 amino acid activation 4 12
GO:0043039 tRNA aminoacylation 5 12
GO:0043170 macromolecule metabolic process 3 12
GO:0043436 oxoacid metabolic process 4 12
GO:0044237 cellular metabolic process 2 12
GO:0044238 primary metabolic process 2 12
GO:0044281 small molecule metabolic process 2 12
GO:0046483 heterocycle metabolic process 3 12
GO:0071704 organic substance metabolic process 2 12
GO:0090304 nucleic acid metabolic process 4 12
GO:1901360 organic cyclic compound metabolic process 3 12
GO:1901564 organonitrogen compound metabolic process 3 12
Molecular functions
Term Name Level Count
GO:0000166 nucleotide binding 3 12
GO:0003824 catalytic activity 1 12
GO:0004812 aminoacyl-tRNA ligase activity 4 12
GO:0004830 tryptophan-tRNA ligase activity 5 12
GO:0005488 binding 1 12
GO:0005524 ATP binding 5 12
GO:0016874 ligase activity 2 12
GO:0016875 ligase activity, forming carbon-oxygen bonds 3 12
GO:0017076 purine nucleotide binding 4 12
GO:0030554 adenyl nucleotide binding 5 12
GO:0032553 ribonucleotide binding 3 12
GO:0032555 purine ribonucleotide binding 4 12
GO:0032559 adenyl ribonucleotide binding 5 12
GO:0035639 purine ribonucleoside triphosphate binding 4 12
GO:0036094 small molecule binding 2 12
GO:0043167 ion binding 2 12
GO:0043168 anion binding 3 12
GO:0097159 organic cyclic compound binding 2 12
GO:0097367 carbohydrate derivative binding 2 12
GO:0140098 catalytic activity, acting on RNA 3 12
GO:0140101 catalytic activity, acting on a tRNA 4 12
GO:0140640 catalytic activity, acting on a nucleic acid 2 12
GO:1901265 nucleoside phosphate binding 3 12
GO:1901363 heterocyclic compound binding 2 12

Putative motif mimicry

Leishmania From To Domain/Motif Score
CLV_NRD_NRD_1 367 369 PF00675 0.380
CLV_NRD_NRD_1 394 396 PF00675 0.622
CLV_NRD_NRD_1 46 48 PF00675 0.299
CLV_NRD_NRD_1 55 57 PF00675 0.313
CLV_PCSK_KEX2_1 55 57 PF00082 0.313
CLV_PCSK_SKI1_1 122 126 PF00082 0.286
CLV_PCSK_SKI1_1 196 200 PF00082 0.235
CLV_PCSK_SKI1_1 24 28 PF00082 0.410
CLV_PCSK_SKI1_1 285 289 PF00082 0.230
CLV_PCSK_SKI1_1 293 297 PF00082 0.255
CLV_PCSK_SKI1_1 323 327 PF00082 0.333
CLV_PCSK_SKI1_1 343 347 PF00082 0.141
CLV_PCSK_SKI1_1 350 354 PF00082 0.223
CLV_PCSK_SKI1_1 369 373 PF00082 0.391
CLV_PCSK_SKI1_1 56 60 PF00082 0.306
DEG_Nend_UBRbox_2 1 3 PF02207 0.555
DOC_AGCK_PIF_2 157 162 PF00069 0.428
DOC_CKS1_1 10 15 PF01111 0.387
DOC_MAPK_gen_1 303 309 PF00069 0.474
DOC_PP1_RVXF_1 150 156 PF00149 0.443
DOC_PP1_RVXF_1 54 61 PF00149 0.322
DOC_PP4_FxxP_1 109 112 PF00568 0.428
DOC_USP7_MATH_1 204 208 PF00917 0.438
DOC_USP7_UBL2_3 122 126 PF12436 0.526
DOC_WW_Pin1_4 280 285 PF00397 0.532
DOC_WW_Pin1_4 9 14 PF00397 0.393
LIG_14-3-3_CanoR_1 368 378 PF00244 0.398
LIG_14-3-3_CanoR_1 84 93 PF00244 0.428
LIG_Actin_WH2_2 126 144 PF00022 0.532
LIG_Actin_WH2_2 236 253 PF00022 0.428
LIG_BRCT_BRCA1_1 208 212 PF00533 0.428
LIG_BRCT_BRCA1_1 256 260 PF00533 0.428
LIG_FHA_1 100 106 PF00498 0.447
LIG_FHA_1 136 142 PF00498 0.428
LIG_FHA_1 238 244 PF00498 0.436
LIG_FHA_1 344 350 PF00498 0.439
LIG_FHA_1 356 362 PF00498 0.495
LIG_FHA_2 116 122 PF00498 0.429
LIG_FHA_2 127 133 PF00498 0.428
LIG_FHA_2 311 317 PF00498 0.465
LIG_FHA_2 370 376 PF00498 0.390
LIG_LIR_Apic_2 107 112 PF02991 0.428
LIG_LIR_Gen_1 159 167 PF02991 0.452
LIG_LIR_Gen_1 19 29 PF02991 0.370
LIG_LIR_Gen_1 377 387 PF02991 0.502
LIG_LIR_Nem_3 154 160 PF02991 0.428
LIG_LIR_Nem_3 19 25 PF02991 0.371
LIG_LIR_Nem_3 209 215 PF02991 0.457
LIG_LIR_Nem_3 234 239 PF02991 0.455
LIG_LIR_Nem_3 257 263 PF02991 0.428
LIG_LIR_Nem_3 377 382 PF02991 0.502
LIG_MLH1_MIPbox_1 256 260 PF16413 0.428
LIG_Pex14_1 321 325 PF04695 0.428
LIG_Pex14_2 208 212 PF04695 0.428
LIG_REV1ctd_RIR_1 121 130 PF16727 0.470
LIG_REV1ctd_RIR_1 57 67 PF16727 0.292
LIG_SH2_CRK 167 171 PF00017 0.428
LIG_SH2_CRK 22 26 PF00017 0.357
LIG_SH2_STAP1 22 26 PF00017 0.347
LIG_SH2_STAT5 162 165 PF00017 0.495
LIG_SH2_STAT5 177 180 PF00017 0.495
LIG_SH2_STAT5 236 239 PF00017 0.444
LIG_SH2_STAT5 249 252 PF00017 0.428
LIG_SH2_STAT5 79 82 PF00017 0.436
LIG_SH3_3 312 318 PF00018 0.428
LIG_SH3_3 7 13 PF00018 0.418
LIG_TRAF2_1 363 366 PF00917 0.430
LIG_TRAF2_1 388 391 PF00917 0.425
LIG_TRAF2_1 5 8 PF00917 0.554
LIG_TYR_ITIM 20 25 PF00017 0.364
LIG_UBA3_1 96 103 PF00899 0.439
MOD_CDK_SPK_2 280 285 PF00069 0.532
MOD_CK1_1 271 277 PF00069 0.439
MOD_CK1_1 359 365 PF00069 0.485
MOD_CK1_1 87 93 PF00069 0.435
MOD_CK2_1 115 121 PF00069 0.432
MOD_CK2_1 126 132 PF00069 0.428
MOD_GlcNHglycan 208 211 PF01048 0.271
MOD_GlcNHglycan 263 266 PF01048 0.251
MOD_GlcNHglycan 296 299 PF01048 0.228
MOD_GSK3_1 355 362 PF00069 0.533
MOD_NEK2_1 105 110 PF00069 0.455
MOD_NEK2_1 263 268 PF00069 0.454
MOD_NEK2_1 270 275 PF00069 0.461
MOD_NEK2_1 99 104 PF00069 0.452
MOD_PIKK_1 177 183 PF00454 0.428
MOD_PKA_1 369 375 PF00069 0.464
MOD_PKA_2 237 243 PF00069 0.433
MOD_PKA_2 43 49 PF00069 0.502
MOD_Plk_1 126 132 PF00069 0.467
MOD_Plk_1 330 336 PF00069 0.415
MOD_Plk_4 151 157 PF00069 0.428
MOD_Plk_4 356 362 PF00069 0.427
MOD_ProDKin_1 280 286 PF00069 0.532
MOD_ProDKin_1 9 15 PF00069 0.393
MOD_SUMO_for_1 188 191 PF00179 0.437
MOD_SUMO_for_1 388 391 PF00179 0.425
MOD_SUMO_rev_2 119 124 PF00179 0.428
TRG_DiLeu_BaEn_4 330 336 PF01217 0.532
TRG_ENDOCYTIC_2 167 170 PF00928 0.428
TRG_ENDOCYTIC_2 22 25 PF00928 0.414
TRG_ENDOCYTIC_2 236 239 PF00928 0.428
TRG_ER_diArg_1 54 56 PF00400 0.302
TRG_NLS_Bipartite_1 350 372 PF00514 0.576
TRG_NLS_MonoExtC_3 367 373 PF00514 0.460
TRG_NLS_MonoExtN_4 44 51 PF00514 0.285

Homologs

Protein Taxonomy Sequence identity Coverage
A0A0N0P3G3 Leptomonas seymouri 86% 100%
A0A0N1HXL2 Leptomonas seymouri 40% 84%
A0A0S4IN16 Bodo saltans 76% 100%
A0A0S4JC70 Bodo saltans 43% 87%
A0A1X0NGJ6 Trypanosomatidae 40% 86%
A0A1X0NZB4 Trypanosomatidae 78% 100%
A0A3R7MPN7 Trypanosoma rangeli 79% 100%
A0A3S7WXL2 Leishmania donovani 44% 96%
A0A3S7X238 Leishmania donovani 99% 100%
A0A422NW64 Trypanosoma rangeli 41% 89%
A2BLD4 Hyperthermus butylicus (strain DSM 5456 / JCM 9403 / PLM1-5) 30% 100%
A3MX72 Pyrobaculum calidifontis (strain DSM 21063 / JCM 11548 / VA1) 38% 100%
A4HCP4 Leishmania braziliensis 38% 100%
A4HH14 Leishmania braziliensis 90% 100%
A4I070 Leishmania infantum 42% 100%
A4WL99 Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321 / PZ6) 35% 100%
B6YUH1 Thermococcus onnurineus (strain NA1) 46% 100%
C6A032 Thermococcus sibiricus (strain DSM 12597 / MM 739) 46% 100%
C9ZKR9 Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972) 79% 100%
E9ADK8 Leishmania major 97% 100%
E9AM73 Leishmania mexicana (strain MHOM/GT/2001/U1103) 96% 100%
E9AW33 Leishmania mexicana (strain MHOM/GT/2001/U1103) 44% 100%
O26352 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) 29% 100%
O59584 Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) 46% 100%
O96771 Encephalitozoon cuniculi (strain GB-M1) 42% 100%
P17248 Bos taurus 56% 83%
P23381 Homo sapiens 56% 84%
P23612 Oryctolagus cuniculus 56% 83%
P32921 Mus musculus 56% 82%
Q09692 Schizosaccharomyces pombe (strain 972 / ATCC 24843) 55% 100%
Q12109 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) 50% 92%
Q4JBG7 Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) 47% 100%
Q4QBE4 Leishmania major 42% 100%
Q55DZ8 Dictyostelium discoideum 53% 99%
Q58810 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) 29% 100%
Q5JEP3 Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) 46% 100%
Q5R4J1 Pongo abelii 56% 84%
Q6P7B0 Rattus norvegicus 56% 82%
Q8TYF7 Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) 32% 100%
Q8U453 Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) 47% 100%
Q8ZTU5 Pyrobaculum aerophilum (strain ATCC 51768 / DSM 7523 / JCM 9630 / CIP 104966 / NBRC 100827 / IM2) 36% 100%
Q976M1 Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) 47% 100%
Q97ZX0 Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) 47% 100%
Q9HN66 Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) 36% 100%
Q9SR15 Arabidopsis thaliana 55% 99%
Q9UY11 Pyrococcus abyssi (strain GE5 / Orsay) 46% 100%
Q9Y924 Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) 30% 100%
V5B4S5 Trypanosoma cruzi 79% 100%

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LeishMANIAdb - Server version: v0.0.2. - Database version: v0.0.1. - ChangeLog - © 2022-2025 Protein Bioinformatics Research Group, Institute of Enzymology, RCNS