LeishMANIAdb
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Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial

Quick info Annotations Function or PPIs Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:
Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial
Gene product:
succinyl-CoA synthetase alpha subunit - putative
Species:
Leishmania infantum
UniProt:
A4I1R2_LEIIN
TriTrypDb:
LINF_250028300
Length:
299

Annotations

Annotations by Jardim et al.

Tricarboxylic acid cycle, succinyl-CoA synthetase alpha subunit

Localization

Secreted promastigote
Source Evidence on protein Close homologs
Cuervo et al. no yes: 0
Hassani et al. no yes: 0
Forrest at al. (metacyclic) no yes: 0
Forrest at al. (procyclic) no yes: 0
Silverman et al. no yes: 0
Pissara et al. yes yes: 30
Secreted amastigote
Source Evidence on protein Close homologs
Pires et al. no yes: 0
Exosome
Source Evidence on protein Close homologs
Silverman et al. no yes: 0
Glycosome
Source Evidence on protein Close homologs
Jamdhade et al. yes yes: 16
Predictions
Source Evidence on protein Close homologs
DeepLoc
SignalP6 no yes: 0, no: 11
NetGPI no yes: 0, no: 11
Cellular components
Term Name Level Count
GO:0005739 mitochondrion 5 12
GO:0043226 organelle 2 12
GO:0043227 membrane-bounded organelle 3 12
GO:0043229 intracellular organelle 3 12
GO:0043231 intracellular membrane-bounded organelle 4 12
GO:0110165 cellular anatomical entity 1 12
GO:0009361 succinate-CoA ligase complex (ADP-forming) 5 1
GO:0032991 protein-containing complex 1 1
GO:0042709 succinate-CoA ligase complex 4 1
GO:0045239 tricarboxylic acid cycle enzyme complex 3 1
GO:1902494 catalytic complex 2 1

Expansion

Sequence features

A4I1R2
Sequence
MSA
Disorder
Secondary
Topology
Domains
SignalP
GPI
Phosphorylations
ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: A4I1R2

Function

Biological processes
Term Name Level Count
GO:0006099 tricarboxylic acid cycle 3 12
GO:0008152 metabolic process 1 12
GO:0044238 primary metabolic process 2 12
Molecular functions
Term Name Level Count
GO:0000166 nucleotide binding 3 12
GO:0003824 catalytic activity 1 12
GO:0004774 succinate-CoA ligase activity 5 12
GO:0004775 succinate-CoA ligase (ADP-forming) activity 6 12
GO:0005488 binding 1 12
GO:0016874 ligase activity 2 12
GO:0016877 ligase activity, forming carbon-sulfur bonds 3 12
GO:0016878 acid-thiol ligase activity 4 12
GO:0036094 small molecule binding 2 12
GO:0097159 organic cyclic compound binding 2 12
GO:1901265 nucleoside phosphate binding 3 12
GO:1901363 heterocyclic compound binding 2 12
GO:0004776 succinate-CoA ligase (GDP-forming) activity 6 1
GO:0016740 transferase activity 2 1
GO:0016746 acyltransferase activity 3 1

Putative motif mimicry

Leishmania From To Domain/Motif Score
CLV_C14_Caspase3-7 280 284 PF00656 0.467
CLV_C14_Caspase3-7 90 94 PF00656 0.313
CLV_NRD_NRD_1 251 253 PF00675 0.289
CLV_NRD_NRD_1 8 10 PF00675 0.505
CLV_PCSK_KEX2_1 251 253 PF00082 0.281
CLV_PCSK_KEX2_1 8 10 PF00082 0.544
CLV_PCSK_PC7_1 4 10 PF00082 0.519
CLV_PCSK_SKI1_1 115 119 PF00082 0.371
CLV_PCSK_SKI1_1 200 204 PF00082 0.399
CLV_PCSK_SKI1_1 271 275 PF00082 0.366
DEG_Nend_Nbox_1 1 3 PF02207 0.452
DOC_CYCLIN_yCln2_LP_2 55 61 PF00134 0.366
DOC_MAPK_gen_1 235 241 PF00069 0.278
DOC_PP2B_LxvP_1 55 58 PF13499 0.270
DOC_PP2B_LxvP_1 77 80 PF13499 0.392
DOC_USP7_MATH_1 237 241 PF00917 0.290
DOC_USP7_MATH_1 258 262 PF00917 0.290
DOC_USP7_MATH_1 72 76 PF00917 0.407
DOC_USP7_MATH_1 80 84 PF00917 0.403
DOC_WW_Pin1_4 229 234 PF00397 0.414
DOC_WW_Pin1_4 281 286 PF00397 0.412
DOC_WW_Pin1_4 43 48 PF00397 0.423
LIG_14-3-3_CanoR_1 113 118 PF00244 0.341
LIG_AP2alpha_2 188 190 PF02296 0.270
LIG_DLG_GKlike_1 113 121 PF00625 0.350
LIG_FHA_1 101 107 PF00498 0.289
LIG_FHA_1 122 128 PF00498 0.329
LIG_FHA_1 13 19 PF00498 0.275
LIG_FHA_1 191 197 PF00498 0.271
LIG_FHA_1 206 212 PF00498 0.270
LIG_FHA_1 37 43 PF00498 0.278
LIG_FHA_1 50 56 PF00498 0.451
LIG_FHA_1 71 77 PF00498 0.431
LIG_FHA_2 170 176 PF00498 0.313
LIG_FHA_2 218 224 PF00498 0.315
LIG_FHA_2 278 284 PF00498 0.494
LIG_FHA_2 60 66 PF00498 0.278
LIG_LIR_Gen_1 163 174 PF02991 0.270
LIG_LIR_LC3C_4 95 100 PF02991 0.270
LIG_LIR_Nem_3 163 169 PF02991 0.270
LIG_SH2_NCK_1 166 170 PF00017 0.270
LIG_SH2_SRC 78 81 PF00017 0.270
LIG_SH2_STAP1 166 170 PF00017 0.298
LIG_SH2_STAT5 78 81 PF00017 0.270
LIG_SH3_3 126 132 PF00018 0.311
LIG_SH3_3 76 82 PF00018 0.297
LIG_SUMO_SIM_anti_2 207 216 PF11976 0.293
LIG_SUMO_SIM_par_1 207 216 PF11976 0.273
LIG_SUMO_SIM_par_1 97 104 PF11976 0.270
LIG_TRAF2_1 220 223 PF00917 0.270
LIG_TRAF2_1 87 90 PF00917 0.270
LIG_TYR_ITIM 164 169 PF00017 0.270
LIG_WRC_WIRS_1 238 243 PF05994 0.268
MOD_CDC14_SPxK_1 232 235 PF00782 0.414
MOD_CDC14_SPxK_1 46 49 PF00782 0.366
MOD_CDK_SPK_2 43 48 PF00069 0.423
MOD_CDK_SPxK_1 229 235 PF00069 0.414
MOD_CDK_SPxK_1 43 49 PF00069 0.366
MOD_CDK_SPxxK_3 229 236 PF00069 0.414
MOD_CK2_1 169 175 PF00069 0.331
MOD_CK2_1 217 223 PF00069 0.270
MOD_CK2_1 59 65 PF00069 0.317
MOD_CK2_1 84 90 PF00069 0.367
MOD_Cter_Amidation 249 252 PF01082 0.270
MOD_Cter_Amidation 268 271 PF01082 0.270
MOD_GlcNHglycan 160 163 PF01048 0.293
MOD_GlcNHglycan 260 263 PF01048 0.271
MOD_GlcNHglycan 4 7 PF01048 0.615
MOD_GSK3_1 113 120 PF00069 0.351
MOD_GSK3_1 156 163 PF00069 0.298
MOD_GSK3_1 277 284 PF00069 0.552
MOD_GSK3_1 80 87 PF00069 0.309
MOD_N-GLC_1 121 126 PF02516 0.360
MOD_N-GLC_1 190 195 PF02516 0.270
MOD_NEK2_1 117 122 PF00069 0.359
MOD_NEK2_1 177 182 PF00069 0.271
MOD_NEK2_1 190 195 PF00069 0.270
MOD_NEK2_1 2 7 PF00069 0.470
MOD_PIKK_1 117 123 PF00454 0.361
MOD_Plk_1 121 127 PF00069 0.354
MOD_Plk_4 113 119 PF00069 0.349
MOD_Plk_4 237 243 PF00069 0.289
MOD_Plk_4 72 78 PF00069 0.290
MOD_ProDKin_1 229 235 PF00069 0.414
MOD_ProDKin_1 281 287 PF00069 0.413
MOD_ProDKin_1 43 49 PF00069 0.423
TRG_DiLeu_BaEn_1 209 214 PF01217 0.290
TRG_DiLeu_BaEn_3 223 229 PF01217 0.290
TRG_DiLeu_BaLyEn_6 122 127 PF01217 0.352
TRG_ENDOCYTIC_2 166 169 PF00928 0.270
TRG_ER_diArg_1 251 253 PF00400 0.290
TRG_ER_diArg_1 7 9 PF00400 0.570
TRG_NES_CRM1_1 110 121 PF08389 0.344

Homologs

Protein Taxonomy Sequence identity Coverage
A0A0S4JKD5 Bodo saltans 75% 100%
A0A1X0NY43 Trypanosomatidae 83% 99%
A0A3Q8IFF5 Leishmania donovani 100% 100%
A0A3R7N4H2 Trypanosoma rangeli 80% 100%
A4HEB6 Leishmania braziliensis 96% 100%
B3FHT4 Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) 68% 94%
C9ZKB8 Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972) 78% 99%
E9AXU6 Leishmania mexicana (strain MHOM/GT/2001/U1103) 98% 100%
E9AXU7 Leishmania mexicana (strain MHOM/GT/2001/U1103) 99% 100%
O08371 Rickettsia prowazekii (strain Madrid E) 66% 100%
O13750 Schizosaccharomyces pombe (strain 972 / ATCC 24843) 65% 90%
O19069 Sus scrofa 67% 86%
O26663 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) 51% 100%
O28098 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) 52% 100%
O28733 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) 50% 100%
O67547 Aquifex aeolicus (strain VF5) 56% 98%
P09143 Thermus thermophilus 55% 100%
P0AGE9 Escherichia coli (strain K12) 62% 100%
P0AGF0 Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) 62% 100%
P0AGF1 Escherichia coli O157:H7 62% 100%
P13086 Rattus norvegicus 69% 86%
P36967 Dictyostelium discoideum 66% 95%
P45102 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) 62% 100%
P53399 Trichomonas vaginalis 57% 97%
P53400 Trichomonas vaginalis 57% 97%
P53401 Trichomonas vaginalis 57% 97%
P53591 Coxiella burnetii (strain RSA 493 / Nine Mile phase I) 61% 100%
P53595 Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1) 52% 100%
P53596 Caenorhabditis elegans 71% 93%
P53597 Homo sapiens 67% 86%
P53598 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) 59% 91%
P66866 Staphylococcus aureus (strain Mu50 / ATCC 700699) 59% 99%
P68209 Arabidopsis thaliana 69% 86%
P80865 Bacillus subtilis (strain 168) 61% 100%
P99070 Staphylococcus aureus (strain N315) 59% 99%
P9WGC6 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) 49% 99%
P9WGC7 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) 49% 99%
Q1RH56 Rickettsia bellii (strain RML369-C) 69% 100%
Q4Q9M4 Leishmania major 100% 100%
Q4ULQ8 Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) 67% 100%
Q51567 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) 65% 100%
Q58643 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) 50% 100%
Q58DR8 Bos taurus 66% 86%
Q5HGI6 Staphylococcus aureus (strain COL) 59% 99%
Q5HPU4 Staphylococcus epidermidis (strain ATCC 35984 / RP62A) 58% 99%
Q6DQL1 Solanum lycopersicum 70% 89%
Q6G9W7 Staphylococcus aureus (strain MSSA476) 59% 99%
Q6GHI9 Staphylococcus aureus (strain MRSA252) 59% 99%
Q6ZL94 Oryza sativa subsp. japonica 69% 90%
Q7U0Z0 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) 49% 99%
Q8CPH4 Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) 58% 99%
Q8GTQ9 Solanum lycopersicum 69% 90%
Q8LAD2 Arabidopsis thaliana 70% 88%
Q8NX01 Staphylococcus aureus (strain MW2) 59% 99%
Q92I22 Rickettsia conorii (strain ATCC VR-613 / Malish 7) 66% 100%
Q94522 Drosophila melanogaster 67% 91%
Q9AKE1 Rickettsia typhi (strain ATCC VR-144 / Wilmington) 66% 100%
Q9P727 Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) 66% 90%
Q9WUM5 Mus musculus 68% 86%
Q9YGD2 Columba livia 65% 98%
V5B829 Trypanosoma cruzi 79% 100%

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LeishMANIAdb - Server version: v0.0.2. - Database version: v0.0.1. - ChangeLog - © 2022-2025 Protein Bioinformatics Research Group, Institute of Enzymology, RCNS