40S ribosomal protein S30

Quick info Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:

Gene product:

40S ribosomal protein S30, putative

Species:

Leishmania braziliensis

UniProt:

A4HI18_LEIBR

TriTrypDb:

LbrM.30.0760 , LBRM2903_300013600

Length:

Localization

Secreted promastigote


Source	Evidence on protein	Close homologs
Cuervo et al.	no	yes: 0
Hassani et al.	no	yes: 0
Forrest at al. (metacyclic)	no	yes: 0
Forrest at al. (procyclic)	no	yes: 0
Silverman et al.	no	yes: 0
Pissara et al.	no	yes: 0

Secreted amastigote


Source	Evidence on protein	Close homologs
Pires et al.	no	yes: 0

Exosome


Source	Evidence on protein	Close homologs
Silverman et al.	no	yes: 0

Glycosome


Source	Evidence on protein	Close homologs
Jamdhade et al.	no	yes: 0

Predictions


Source	Evidence on protein	Close homologs
DeepLoc
SignalP6	no	yes: 0, no: 8
NetGPI	no	yes: 0, no: 8

Cellular components
Term	Name	Level	Count
GO:0005840	ribosome	5	8
GO:0032991	protein-containing complex	1	9
GO:0043226	organelle	2	8
GO:0043228	non-membrane-bounded organelle	3	8
GO:0043229	intracellular organelle	3	8
GO:0043232	intracellular non-membrane-bounded organelle	4	8
GO:0110165	cellular anatomical entity	1	8
GO:1990904	ribonucleoprotein complex	2	9
GO:0015935	small ribosomal subunit	4	1
GO:0022627	cytosolic small ribosomal subunit	5	1
GO:0044391	ribosomal subunit	3	1

Expansion

Sequence features

A4HI18

Sequence

MSA

Disorder

Secondary

Topology

Domains

SignalP

GPI

Phosphorylations

ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: A4HI18

Function

Biological processes
Term	Name	Level	Count
GO:0006412	translation	4	9
GO:0006518	peptide metabolic process	4	9
GO:0006807	nitrogen compound metabolic process	2	9
GO:0008152	metabolic process	1	9
GO:0009058	biosynthetic process	2	9
GO:0009059	macromolecule biosynthetic process	4	9
GO:0009987	cellular process	1	9
GO:0019538	protein metabolic process	3	9
GO:0034641	cellular nitrogen compound metabolic process	3	9
GO:0034645	obsolete cellular macromolecule biosynthetic process	4	9
GO:0043043	peptide biosynthetic process	5	9
GO:0043170	macromolecule metabolic process	3	9
GO:0043603	amide metabolic process	3	9
GO:0043604	amide biosynthetic process	4	9
GO:0044237	cellular metabolic process	2	9
GO:0044238	primary metabolic process	2	9
GO:0044249	cellular biosynthetic process	3	9
GO:0044260	obsolete cellular macromolecule metabolic process	3	9
GO:0044271	cellular nitrogen compound biosynthetic process	4	9
GO:0071704	organic substance metabolic process	2	9
GO:1901564	organonitrogen compound metabolic process	3	9
GO:1901566	organonitrogen compound biosynthetic process	4	9
GO:1901576	organic substance biosynthetic process	3	9

Molecular functions
Term	Name	Level	Count
GO:0003735	structural constituent of ribosome	2	9
GO:0005198	structural molecule activity	1	9

Putative motif mimicry


Leishmania	From	To	Domain/Motif	Score
CLV_PCSK_KEX2_1	36	38	PF00082	0.249
CLV_PCSK_KEX2_1	42	44	PF00082	0.249
CLV_PCSK_PC1ET2_1	36	38	PF00082	0.249
CLV_PCSK_PC1ET2_1	42	44	PF00082	0.249
CLV_PCSK_SKI1_1	20	24	PF00082	0.274
CLV_PCSK_SKI1_1	33	37	PF00082	0.246
CLV_PCSK_SKI1_1	42	46	PF00082	0.292
CLV_PCSK_SKI1_1	47	51	PF00082	0.321
DOC_USP7_UBL2_3	50	54	PF12436	0.284
DOC_WW_Pin1_4	15	20	PF00397	0.249
LIG_FHA_1	16	22	PF00498	0.262
LIG_SH2_STAP1	40	44	PF00017	0.284
LIG_SH2_STAT5	40	43	PF00017	0.284
LIG_SH3_3	24	30	PF00018	0.343
LIG_SH3_4	50	57	PF00018	0.284
LIG_TRAF2_1	22	25	PF00917	0.249
MOD_CDK_SPK_2	15	20	PF00069	0.249
MOD_N-GLC_1	15	20	PF02516	0.249
MOD_NEK2_1	38	43	PF00069	0.301
MOD_ProDKin_1	15	21	PF00069	0.249
MOD_SUMO_for_1	22	25	PF00179	0.284
TRG_ER_diArg_1	30	33	PF00400	0.249
TRG_NLS_MonoExtN_4	33	40	PF00514	0.249

Homologs


Protein	Taxonomy	Sequence identity	Coverage
A0A0N0P7E8	Leptomonas seymouri	97%	100%
A0A0S4IQ78	Bodo saltans	83%	100%
A0A1D8PSK2	Candida albicans (strain SC5314 / ATCC MYA-2876)	64%	100%
A0A3Q8IRS7	Leishmania donovani	95%	100%
A4I595	Leishmania infantum	95%	100%
C9ZQM6	Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972)	85%	100%
E9B0J2	Leishmania mexicana (strain MHOM/GT/2001/U1103)	95%	100%
O96269	Plasmodium falciparum (isolate 3D7)	70%	100%
P0CT62	Schizosaccharomyces pombe (strain 972 / ATCC 24843)	69%	100%
P0CT63	Schizosaccharomyces pombe (strain 972 / ATCC 24843)	69%	100%
P0CX33	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)	62%	100%
P0CX34	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)	62%	100%
P49689	Arabidopsis thaliana	67%	100%
Q4Q7P0	Leishmania major	95%	100%
Q556Y1	Dictyostelium discoideum	50%	100%