Ras-like small GTPase, putative

Quick info Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:

Gene product:

ras-like small GTPases, putative

Species:

Leishmania donovani

UniProt:

A0A3S7XBX6_LEIDO

TriTrypDb:

LdBPK_366140.1 , LdCL_360068800 , LDHU3_36.8100

Length:

364

Localization

Secreted promastigote


Source	Evidence on protein	Close homologs
Cuervo et al.	no	yes: 0
Hassani et al.	no	yes: 0
Forrest at al. (metacyclic)	no	yes: 0
Forrest at al. (procyclic)	no	yes: 0
Silverman et al.	no	yes: 0
Pissara et al.	no	yes: 0

Secreted amastigote


Source	Evidence on protein	Close homologs
Pires et al.	no	yes: 0

Exosome


Source	Evidence on protein	Close homologs
Silverman et al.	no	yes: 0

Glycosome


Source	Evidence on protein	Close homologs
Jamdhade et al.	no	yes: 0

Predictions


Source	Evidence on protein	Close homologs
DeepLoc
SignalP6	no	yes: 0, no: 11
NetGPI	no	yes: 0, no: 11

Cellular components
Term	Name	Level	Count
GO:0000323	lytic vacuole	6	1
GO:0005634	nucleus	5	1
GO:0005737	cytoplasm	2	1
GO:0005764	lysosome	7	1
GO:0005773	vacuole	5	1
GO:0032991	protein-containing complex	1	1
GO:0043226	organelle	2	1
GO:0043227	membrane-bounded organelle	3	1
GO:0043229	intracellular organelle	3	1
GO:0043231	intracellular membrane-bounded organelle	4	1
GO:0110165	cellular anatomical entity	1	1
GO:1902494	catalytic complex	2	1
GO:1905360	GTPase complex	3	1
GO:1990131	Gtr1-Gtr2 GTPase complex	4	1

Expansion

Sequence features

A0A3S7XBX6

Sequence

MSA

Disorder

Secondary

Topology

Domains

SignalP

GPI

Phosphorylations

ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: A0A3S7XBX6

Function

Biological processes
Term	Name	Level	Count
GO:0001101	response to acid chemical	3	1
GO:0006950	response to stress	2	1
GO:0007154	cell communication	2	1
GO:0009267	cellular response to starvation	4	1
GO:0009605	response to external stimulus	2	1
GO:0009719	response to endogenous stimulus	2	1
GO:0009894	regulation of catabolic process	4	1
GO:0009966	regulation of signal transduction	4	1
GO:0009967	positive regulation of signal transduction	5	1
GO:0009987	cellular process	1	1
GO:0009991	response to extracellular stimulus	3	1
GO:0010033	response to organic substance	3	1
GO:0010243	response to organonitrogen compound	4	1
GO:0010506	regulation of autophagy	6	1
GO:0010646	regulation of cell communication	4	1
GO:0010647	positive regulation of cell communication	5	1
GO:0019222	regulation of metabolic process	3	1
GO:0023051	regulation of signaling	3	1
GO:0023056	positive regulation of signaling	4	1
GO:0031323	regulation of cellular metabolic process	4	1
GO:0031329	regulation of cellular catabolic process	5	1
GO:0031667	response to nutrient levels	4	1
GO:0031668	cellular response to extracellular stimulus	3	1
GO:0031669	cellular response to nutrient levels	4	1
GO:0032006	regulation of TOR signaling	6	1
GO:0032008	positive regulation of TOR signaling	7	1
GO:0033554	cellular response to stress	3	1
GO:0042221	response to chemical	2	1
GO:0042594	response to starvation	3	1
GO:0043200	response to amino acid	4	1
GO:0048518	positive regulation of biological process	3	1
GO:0048522	positive regulation of cellular process	4	1
GO:0048583	regulation of response to stimulus	3	1
GO:0048584	positive regulation of response to stimulus	4	1
GO:0050789	regulation of biological process	2	1
GO:0050794	regulation of cellular process	3	1
GO:0050896	response to stimulus	1	1
GO:0051716	cellular response to stimulus	2	1
GO:0065007	biological regulation	1	1
GO:0070887	cellular response to chemical stimulus	3	1
GO:0071229	cellular response to acid chemical	4	1
GO:0071230	cellular response to amino acid stimulus	5	1
GO:0071310	cellular response to organic substance	4	1
GO:0071417	cellular response to organonitrogen compound	4	1
GO:0071495	cellular response to endogenous stimulus	3	1
GO:0071496	cellular response to external stimulus	3	1
GO:1901698	response to nitrogen compound	3	1
GO:1901699	cellular response to nitrogen compound	4	1
GO:1901700	response to oxygen-containing compound	3	1
GO:1901701	cellular response to oxygen-containing compound	4	1
GO:1902531	regulation of intracellular signal transduction	5	1
GO:1902533	positive regulation of intracellular signal transduction	6	1

Molecular functions
Term	Name	Level	Count
GO:0000166	nucleotide binding	3	12
GO:0005488	binding	1	12
GO:0005525	GTP binding	5	12
GO:0017076	purine nucleotide binding	4	12
GO:0019001	guanyl nucleotide binding	5	12
GO:0032553	ribonucleotide binding	3	12
GO:0032555	purine ribonucleotide binding	4	12
GO:0032561	guanyl ribonucleotide binding	5	12
GO:0035639	purine ribonucleoside triphosphate binding	4	12
GO:0036094	small molecule binding	2	12
GO:0043167	ion binding	2	12
GO:0043168	anion binding	3	12
GO:0097159	organic cyclic compound binding	2	12
GO:0097367	carbohydrate derivative binding	2	12
GO:1901265	nucleoside phosphate binding	3	12
GO:1901363	heterocyclic compound binding	2	12
GO:0003824	catalytic activity	1	1
GO:0003924	GTPase activity	7	1
GO:0016462	pyrophosphatase activity	5	1
GO:0016787	hydrolase activity	2	1
GO:0016817	hydrolase activity, acting on acid anhydrides	3	1
GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	4	1
GO:0017111	ribonucleoside triphosphate phosphatase activity	6	1

Putative motif mimicry


Leishmania	From	To	Domain/Motif	Score
CLV_C14_Caspase3-7	287	291	PF00656	0.486
CLV_NRD_NRD_1	148	150	PF00675	0.340
CLV_NRD_NRD_1	16	18	PF00675	0.308
CLV_PCSK_KEX2_1	148	150	PF00082	0.340
CLV_PCSK_SKI1_1	10	14	PF00082	0.304
CLV_PCSK_SKI1_1	155	159	PF00082	0.439
CLV_PCSK_SKI1_1	188	192	PF00082	0.339
CLV_PCSK_SKI1_1	26	30	PF00082	0.304
CLV_PCSK_SKI1_1	353	357	PF00082	0.533
DOC_AGCK_PIF_2	59	64	PF00069	0.304
DOC_CYCLIN_yClb1_LxF_4	163	168	PF00134	0.389
DOC_MAPK_MEF2A_6	117	126	PF00069	0.361
DOC_PP1_RVXF_1	163	169	PF00149	0.320
DOC_PP1_RVXF_1	24	30	PF00149	0.304
DOC_PP2B_LxvP_1	6	9	PF13499	0.550
DOC_USP7_MATH_1	34	38	PF00917	0.320
DOC_USP7_MATH_1	46	50	PF00917	0.304
DOC_USP7_MATH_1	70	74	PF00917	0.363
DOC_WW_Pin1_4	191	196	PF00397	0.316
LIG_Actin_WH2_2	1	19	PF00022	0.339
LIG_AP2alpha_2	69	71	PF02296	0.339
LIG_BIR_II_1	1	5	PF00653	0.592
LIG_BRCT_BRCA1_1	212	216	PF00533	0.309
LIG_BRCT_BRCA1_1	52	56	PF00533	0.304
LIG_deltaCOP1_diTrp_1	60	64	PF00928	0.304
LIG_EH1_1	78	86	PF00400	0.339
LIG_eIF4E_1	79	85	PF01652	0.339
LIG_FHA_1	192	198	PF00498	0.314
LIG_FHA_1	234	240	PF00498	0.304
LIG_FHA_1	326	332	PF00498	0.386
LIG_FHA_2	334	340	PF00498	0.477
LIG_LIR_Apic_2	60	65	PF02991	0.291
LIG_LIR_Gen_1	177	186	PF02991	0.304
LIG_LIR_Gen_1	211	222	PF02991	0.304
LIG_LIR_Gen_1	53	64	PF02991	0.304
LIG_LIR_LC3C_4	183	186	PF02991	0.320
LIG_LIR_Nem_3	177	182	PF02991	0.304
LIG_LIR_Nem_3	211	217	PF02991	0.304
LIG_LIR_Nem_3	220	226	PF02991	0.304
LIG_LIR_Nem_3	53	59	PF02991	0.291
LIG_MAD2	26	34	PF02301	0.304
LIG_SH2_PTP2	223	226	PF00017	0.425
LIG_SH2_STAT3	254	257	PF00017	0.502
LIG_SH2_STAT5	196	199	PF00017	0.304
LIG_SH2_STAT5	214	217	PF00017	0.304
LIG_SH2_STAT5	223	226	PF00017	0.304
LIG_SH2_STAT5	319	322	PF00017	0.354
LIG_SH2_STAT5	93	96	PF00017	0.425
LIG_SUMO_SIM_anti_2	241	248	PF11976	0.362
LIG_SUMO_SIM_anti_2	325	331	PF11976	0.362
LIG_TYR_ITIM	212	217	PF00017	0.304
LIG_UBA3_1	12	21	PF00899	0.290
LIG_UBA3_1	5	10	PF00899	0.474
MOD_CK1_1	19	25	PF00069	0.304
MOD_CK1_1	269	275	PF00069	0.693
MOD_CK1_1	279	285	PF00069	0.539
MOD_CK1_1	288	294	PF00069	0.664
MOD_CK1_1	297	303	PF00069	0.571
MOD_CK1_1	325	331	PF00069	0.479
MOD_CK1_1	74	80	PF00069	0.425
MOD_CK2_1	288	294	PF00069	0.552
MOD_CK2_1	333	339	PF00069	0.530
MOD_GlcNHglycan	112	115	PF01048	0.413
MOD_GlcNHglycan	18	21	PF01048	0.304
MOD_GlcNHglycan	267	271	PF01048	0.623
MOD_GlcNHglycan	278	281	PF01048	0.636
MOD_GlcNHglycan	290	293	PF01048	0.628
MOD_GlcNHglycan	36	39	PF01048	0.425
MOD_GlcNHglycan	361	364	PF01048	0.607
MOD_GSK3_1	16	23	PF00069	0.301
MOD_GSK3_1	191	198	PF00069	0.316
MOD_GSK3_1	284	291	PF00069	0.485
MOD_GSK3_1	36	43	PF00069	0.339
MOD_GSK3_1	46	53	PF00069	0.239
MOD_GSK3_1	70	77	PF00069	0.374
MOD_N-GLC_1	168	173	PF02516	0.297
MOD_N-GLC_1	359	364	PF02516	0.585
MOD_N-GLC_1	74	79	PF02516	0.329
MOD_NEK2_1	108	113	PF00069	0.304
MOD_NEK2_1	142	147	PF00069	0.320
MOD_NEK2_1	16	21	PF00069	0.316
MOD_NEK2_1	168	173	PF00069	0.323
MOD_NEK2_1	174	179	PF00069	0.333
MOD_NEK2_1	189	194	PF00069	0.304
MOD_NEK2_1	203	208	PF00069	0.267
MOD_NEK2_1	215	220	PF00069	0.282
MOD_NEK2_1	276	281	PF00069	0.646
MOD_NEK2_1	333	338	PF00069	0.548
MOD_NEK2_1	359	364	PF00069	0.611
MOD_NEK2_1	40	45	PF00069	0.389
MOD_NEK2_1	71	76	PF00069	0.375
MOD_PKA_2	16	22	PF00069	0.320
MOD_Plk_1	168	174	PF00069	0.304
MOD_Plk_1	210	216	PF00069	0.304
MOD_Plk_1	46	52	PF00069	0.304
MOD_Plk_1	74	80	PF00069	0.348
MOD_Plk_2-3	132	138	PF00069	0.320
MOD_Plk_4	169	175	PF00069	0.304
MOD_Plk_4	210	216	PF00069	0.304
MOD_Plk_4	325	331	PF00069	0.358
MOD_ProDKin_1	191	197	PF00069	0.316
MOD_SUMO_rev_2	151	157	PF00179	0.451
TRG_DiLeu_BaEn_1	153	158	PF01217	0.354
TRG_DiLeu_BaEn_1	339	344	PF01217	0.538
TRG_DiLeu_BaLyEn_6	104	109	PF01217	0.320
TRG_ENDOCYTIC_2	214	217	PF00928	0.304
TRG_ENDOCYTIC_2	223	226	PF00928	0.304
TRG_ER_diArg_1	105	108	PF00400	0.339
TRG_ER_diArg_1	148	150	PF00400	0.341
TRG_ER_diArg_1	255	258	PF00400	0.605
TRG_NES_CRM1_1	322	335	PF08389	0.368
TRG_Pf-PMV_PEXEL_1	155	159	PF00026	0.429
TRG_Pf-PMV_PEXEL_1	341	345	PF00026	0.410
TRG_Pf-PMV_PEXEL_1	98	102	PF00026	0.354

Homologs


Protein	Taxonomy	Sequence identity	Coverage
A0A0N1PFN5	Leptomonas seymouri	84%	99%
A0A0S4J6M9	Bodo saltans	51%	100%
A0A1X0NLK4	Trypanosomatidae	66%	100%
A0A3R7KR72	Trypanosoma rangeli	67%	100%
A4HQA6	Leishmania braziliensis	92%	100%
A4IE01	Leishmania infantum	100%	100%
D0A404	Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972)	64%	100%
E9AU23	Leishmania mexicana (strain MHOM/GT/2001/U1103)	95%	100%
O74544	Schizosaccharomyces pombe (strain 972 / ATCC 24843)	37%	100%
P53290	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)	36%	100%
Q4Q0H2	Leishmania major	96%	100%
Q5VZM2	Homo sapiens	24%	97%
Q63487	Rattus norvegicus	25%	97%
Q6NTA4	Mus musculus	25%	97%
Q7TT45	Mus musculus	38%	81%
Q99K70	Mus musculus	37%	91%
Q9HB90	Homo sapiens	37%	91%
Q9NQL2	Homo sapiens	36%	91%
V5BT86	Trypanosoma cruzi	68%	100%