LeishMANIAdb
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Spindle pole body component

Quick info Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:
Spindle pole body component
Gene product:
gamma-tubulin complex component 2
Species:
Leishmania donovani
UniProt:
A0A3S7XBK0_LEIDO
TriTrypDb:
LdBPK_364610.1 * , LdCL_360053200 , LDHU3_36.6220
Length:
865

Localization

Secreted promastigote
Source Evidence on protein Close homologs
Cuervo et al. no yes: 0
Hassani et al. no yes: 0
Forrest at al. (metacyclic) no yes: 0
Forrest at al. (procyclic) no yes: 0
Silverman et al. no yes: 0
Pissara et al. no yes: 0
Secreted amastigote
Source Evidence on protein Close homologs
Pires et al. no yes: 0
Exosome
Source Evidence on protein Close homologs
Silverman et al. no yes: 0
Glycosome
Source Evidence on protein Close homologs
Jamdhade et al. yes yes: 9
Predictions
Source Evidence on protein Close homologs
DeepLoc
SignalP6 no yes: 0, no: 11
NetGPI no yes: 0, no: 11
Cellular components
Term Name Level Count
GO:0000922 spindle pole 2 12
GO:0005737 cytoplasm 2 12
GO:0005815 microtubule organizing center 2 12
GO:0005874 microtubule 6 12
GO:0099080 supramolecular complex 2 12
GO:0099081 supramolecular polymer 3 12
GO:0099512 supramolecular fiber 4 12
GO:0099513 polymeric cytoskeletal fiber 5 12
GO:0110165 cellular anatomical entity 1 12
GO:0000923 equatorial microtubule organizing center 3 1
GO:0000930 gamma-tubulin complex 2 1
GO:0005813 centrosome 3 1
GO:0008275 gamma-tubulin small complex 3 1
GO:0032991 protein-containing complex 1 1
GO:0036064 ciliary basal body 3 1

Expansion

Sequence features

A0A3S7XBK0
Sequence
MSA
Disorder
Secondary
Topology
Domains
SignalP
GPI
Phosphorylations
ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: A0A3S7XBK0

Function

Biological processes
Term Name Level Count
GO:0000226 microtubule cytoskeleton organization 3 12
GO:0006996 organelle organization 4 12
GO:0007010 cytoskeleton organization 5 12
GO:0007017 microtubule-based process 2 12
GO:0007020 microtubule nucleation 4 12
GO:0009987 cellular process 1 12
GO:0016043 cellular component organization 3 12
GO:0071840 cellular component organization or biogenesis 2 12
GO:0000278 mitotic cell cycle 3 1
GO:0007049 cell cycle 2 1
GO:0007051 spindle organization 3 1
GO:0022402 cell cycle process 2 1
GO:0022414 reproductive process 1 1
GO:0022607 cellular component assembly 4 1
GO:0031122 cytoplasmic microtubule organization 4 1
GO:0051225 spindle assembly 4 1
GO:0051321 meiotic cell cycle 2 1
GO:0070925 organelle assembly 5 1
GO:0097435 supramolecular fiber organization 4 1
GO:0140694 non-membrane-bounded organelle assembly 6 1
GO:1904158 axonemal central apparatus assembly 5 1
Molecular functions
Term Name Level Count
GO:0005488 binding 1 12
GO:0005515 protein binding 2 12
GO:0008092 cytoskeletal protein binding 3 12
GO:0015631 tubulin binding 4 12
GO:0043015 gamma-tubulin binding 5 12

Putative motif mimicry

Leishmania From To Domain/Motif Score
CLV_C14_Caspase3-7 485 489 PF00656 0.669
CLV_C14_Caspase3-7 550 554 PF00656 0.466
CLV_C14_Caspase3-7 58 62 PF00656 0.561
CLV_NRD_NRD_1 323 325 PF00675 0.255
CLV_NRD_NRD_1 411 413 PF00675 0.300
CLV_NRD_NRD_1 424 426 PF00675 0.199
CLV_NRD_NRD_1 634 636 PF00675 0.293
CLV_NRD_NRD_1 647 649 PF00675 0.147
CLV_PCSK_KEX2_1 16 18 PF00082 0.548
CLV_PCSK_KEX2_1 323 325 PF00082 0.255
CLV_PCSK_KEX2_1 410 412 PF00082 0.305
CLV_PCSK_KEX2_1 424 426 PF00082 0.194
CLV_PCSK_KEX2_1 634 636 PF00082 0.314
CLV_PCSK_KEX2_1 647 649 PF00082 0.157
CLV_PCSK_PC1ET2_1 16 18 PF00082 0.590
CLV_PCSK_PC1ET2_1 410 412 PF00082 0.286
CLV_PCSK_PC7_1 406 412 PF00082 0.286
CLV_PCSK_SKI1_1 260 264 PF00082 0.266
CLV_PCSK_SKI1_1 411 415 PF00082 0.343
CLV_PCSK_SKI1_1 442 446 PF00082 0.265
CLV_PCSK_SKI1_1 534 538 PF00082 0.338
CLV_Separin_Metazoa 248 252 PF03568 0.466
DEG_APCC_DBOX_1 646 654 PF00400 0.559
DEG_SCF_FBW7_1 78 83 PF00400 0.568
DEG_SCF_TRCP1_1 613 618 PF00400 0.559
DEG_SPOP_SBC_1 156 160 PF00917 0.545
DEG_SPOP_SBC_1 279 283 PF00917 0.543
DEG_SPOP_SBC_1 767 771 PF00917 0.537
DOC_CKS1_1 150 155 PF01111 0.537
DOC_CKS1_1 437 442 PF01111 0.559
DOC_CYCLIN_RxL_1 645 656 PF00134 0.537
DOC_CYCLIN_yCln2_LP_2 659 665 PF00134 0.455
DOC_CYCLIN_yCln2_LP_2 820 826 PF00134 0.471
DOC_MAPK_DCC_7 323 332 PF00069 0.496
DOC_MAPK_gen_1 258 267 PF00069 0.541
DOC_MAPK_gen_1 565 573 PF00069 0.541
DOC_MAPK_gen_1 647 655 PF00069 0.495
DOC_MAPK_HePTP_8 320 332 PF00069 0.455
DOC_MAPK_HePTP_8 667 679 PF00069 0.541
DOC_MAPK_MEF2A_6 323 332 PF00069 0.474
DOC_MAPK_MEF2A_6 430 437 PF00069 0.541
DOC_MAPK_MEF2A_6 567 575 PF00069 0.461
DOC_MAPK_MEF2A_6 670 679 PF00069 0.530
DOC_PP1_RVXF_1 15 22 PF00149 0.459
DOC_PP1_RVXF_1 443 450 PF00149 0.497
DOC_PP1_RVXF_1 535 541 PF00149 0.559
DOC_PP1_RVXF_1 678 685 PF00149 0.516
DOC_PP4_FxxP_1 285 288 PF00568 0.530
DOC_USP7_MATH_1 156 160 PF00917 0.542
DOC_USP7_MATH_1 280 284 PF00917 0.546
DOC_USP7_MATH_1 286 290 PF00917 0.551
DOC_USP7_MATH_1 396 400 PF00917 0.456
DOC_USP7_MATH_1 482 486 PF00917 0.713
DOC_USP7_MATH_1 62 66 PF00917 0.605
DOC_USP7_MATH_1 630 634 PF00917 0.475
DOC_USP7_MATH_1 646 650 PF00917 0.535
DOC_USP7_MATH_1 73 77 PF00917 0.678
DOC_USP7_MATH_1 856 860 PF00917 0.618
DOC_USP7_MATH_1 861 865 PF00917 0.629
DOC_USP7_MATH_1 98 102 PF00917 0.683
DOC_WW_Pin1_4 149 154 PF00397 0.538
DOC_WW_Pin1_4 160 165 PF00397 0.549
DOC_WW_Pin1_4 168 173 PF00397 0.528
DOC_WW_Pin1_4 284 289 PF00397 0.559
DOC_WW_Pin1_4 358 363 PF00397 0.441
DOC_WW_Pin1_4 436 441 PF00397 0.559
DOC_WW_Pin1_4 521 526 PF00397 0.459
DOC_WW_Pin1_4 76 81 PF00397 0.596
DOC_WW_Pin1_4 819 824 PF00397 0.446
LIG_14-3-3_CanoR_1 323 327 PF00244 0.473
LIG_14-3-3_CanoR_1 411 420 PF00244 0.496
LIG_14-3-3_CanoR_1 424 429 PF00244 0.449
LIG_14-3-3_CanoR_1 581 587 PF00244 0.506
LIG_14-3-3_CanoR_1 634 638 PF00244 0.506
LIG_14-3-3_CanoR_1 647 651 PF00244 0.425
LIG_14-3-3_CanoR_1 773 778 PF00244 0.446
LIG_14-3-3_CanoR_1 815 824 PF00244 0.533
LIG_Actin_WH2_2 245 262 PF00022 0.502
LIG_BIR_II_1 1 5 PF00653 0.540
LIG_BRCT_BRCA1_1 281 285 PF00533 0.530
LIG_Clathr_ClatBox_1 652 656 PF01394 0.455
LIG_deltaCOP1_diTrp_1 546 551 PF00928 0.455
LIG_deltaCOP1_diTrp_1 6 10 PF00928 0.534
LIG_DLG_GKlike_1 424 432 PF00625 0.541
LIG_EH1_1 568 576 PF00400 0.466
LIG_eIF4E_1 203 209 PF01652 0.466
LIG_FHA_1 133 139 PF00498 0.368
LIG_FHA_1 288 294 PF00498 0.527
LIG_FHA_1 317 323 PF00498 0.571
LIG_FHA_1 38 44 PF00498 0.478
LIG_FHA_1 467 473 PF00498 0.412
LIG_FHA_1 618 624 PF00498 0.548
LIG_FHA_1 626 632 PF00498 0.559
LIG_FHA_1 662 668 PF00498 0.455
LIG_FHA_1 670 676 PF00498 0.455
LIG_FHA_1 696 702 PF00498 0.559
LIG_FHA_1 762 768 PF00498 0.556
LIG_FHA_1 79 85 PF00498 0.774
LIG_FHA_1 796 802 PF00498 0.507
LIG_FHA_2 598 604 PF00498 0.522
LIG_FHA_2 834 840 PF00498 0.446
LIG_Integrin_RGD_1 544 546 PF01839 0.266
LIG_Integrin_RGDW_4 544 547 PF00362 0.266
LIG_LIR_Apic_2 282 288 PF02991 0.530
LIG_LIR_Gen_1 190 198 PF02991 0.466
LIG_LIR_Gen_1 4 14 PF02991 0.452
LIG_LIR_Gen_1 585 596 PF02991 0.468
LIG_LIR_Gen_1 732 742 PF02991 0.509
LIG_LIR_Gen_1 784 792 PF02991 0.473
LIG_LIR_Gen_1 836 844 PF02991 0.446
LIG_LIR_Nem_3 190 195 PF02991 0.511
LIG_LIR_Nem_3 343 349 PF02991 0.489
LIG_LIR_Nem_3 4 10 PF02991 0.441
LIG_LIR_Nem_3 585 591 PF02991 0.468
LIG_LIR_Nem_3 732 738 PF02991 0.509
LIG_LIR_Nem_3 756 762 PF02991 0.430
LIG_LIR_Nem_3 771 777 PF02991 0.481
LIG_LIR_Nem_3 784 790 PF02991 0.437
LIG_LIR_Nem_3 827 831 PF02991 0.456
LIG_LIR_Nem_3 836 840 PF02991 0.448
LIG_LYPXL_yS_3 828 831 PF13949 0.446
LIG_MYND_1 829 833 PF01753 0.446
LIG_NRBOX 316 322 PF00104 0.455
LIG_NRBOX 600 606 PF00104 0.541
LIG_PCNA_yPIPBox_3 598 612 PF02747 0.559
LIG_Pex14_1 547 551 PF04695 0.455
LIG_Pex14_2 422 426 PF04695 0.466
LIG_Pex14_2 718 722 PF04695 0.458
LIG_Rb_LxCxE_1 190 207 PF01857 0.541
LIG_REV1ctd_RIR_1 446 456 PF16727 0.541
LIG_SH2_CRK 453 457 PF00017 0.455
LIG_SH2_GRB2like 697 700 PF00017 0.537
LIG_SH2_NCK_1 151 155 PF00017 0.486
LIG_SH2_STAP1 224 228 PF00017 0.516
LIG_SH2_STAP1 697 701 PF00017 0.537
LIG_SH2_STAP1 725 729 PF00017 0.446
LIG_SH2_STAT3 224 227 PF00017 0.541
LIG_SH2_STAT3 539 542 PF00017 0.516
LIG_SH2_STAT3 850 853 PF00017 0.499
LIG_SH2_STAT5 151 154 PF00017 0.529
LIG_SH2_STAT5 329 332 PF00017 0.455
LIG_SH2_STAT5 453 456 PF00017 0.457
LIG_SH2_STAT5 539 542 PF00017 0.455
LIG_SH2_STAT5 697 700 PF00017 0.530
LIG_SH3_3 150 156 PF00018 0.559
LIG_SH3_3 169 175 PF00018 0.541
LIG_SH3_3 351 357 PF00018 0.523
LIG_SH3_3 484 490 PF00018 0.628
LIG_SH3_3 727 733 PF00018 0.446
LIG_SH3_3 820 826 PF00018 0.509
LIG_SUMO_SIM_anti_2 207 212 PF11976 0.541
LIG_SUMO_SIM_anti_2 316 322 PF11976 0.486
LIG_SUMO_SIM_anti_2 44 50 PF11976 0.417
LIG_SUMO_SIM_anti_2 526 531 PF11976 0.426
LIG_SUMO_SIM_anti_2 649 654 PF11976 0.516
LIG_SUMO_SIM_par_1 663 668 PF11976 0.541
LIG_SUMO_SIM_par_1 779 785 PF11976 0.460
LIG_TRAF2_1 600 603 PF00917 0.541
LIG_TRFH_1 729 733 PF08558 0.422
LIG_UBA3_1 529 537 PF00899 0.307
LIG_UBA3_1 678 686 PF00899 0.328
MOD_CDK_SPK_2 160 165 PF00069 0.391
MOD_CDK_SPxK_1 436 442 PF00069 0.453
MOD_CDK_SPxK_1 76 82 PF00069 0.566
MOD_CK1_1 119 125 PF00069 0.565
MOD_CK1_1 160 166 PF00069 0.406
MOD_CK1_1 177 183 PF00069 0.261
MOD_CK1_1 2 8 PF00069 0.546
MOD_CK1_1 204 210 PF00069 0.453
MOD_CK1_1 287 293 PF00069 0.426
MOD_CK1_1 397 403 PF00069 0.426
MOD_CK1_1 554 560 PF00069 0.428
MOD_CK1_1 582 588 PF00069 0.428
MOD_CK1_1 633 639 PF00069 0.350
MOD_CK1_1 76 82 PF00069 0.728
MOD_CK1_1 795 801 PF00069 0.357
MOD_CK2_1 160 166 PF00069 0.405
MOD_CK2_1 177 183 PF00069 0.429
MOD_CK2_1 597 603 PF00069 0.330
MOD_GlcNHglycan 100 103 PF01048 0.725
MOD_GlcNHglycan 159 162 PF01048 0.421
MOD_GlcNHglycan 269 272 PF01048 0.350
MOD_GlcNHglycan 308 311 PF01048 0.326
MOD_GlcNHglycan 338 341 PF01048 0.456
MOD_GlcNHglycan 383 386 PF01048 0.438
MOD_GlcNHglycan 396 399 PF01048 0.380
MOD_GlcNHglycan 497 500 PF01048 0.517
MOD_GlcNHglycan 514 517 PF01048 0.356
MOD_GlcNHglycan 553 556 PF01048 0.342
MOD_GlcNHglycan 57 60 PF01048 0.536
MOD_GlcNHglycan 613 616 PF01048 0.394
MOD_GlcNHglycan 704 708 PF01048 0.397
MOD_GlcNHglycan 73 76 PF01048 0.753
MOD_GlcNHglycan 858 861 PF01048 0.720
MOD_GSK3_1 128 135 PF00069 0.531
MOD_GSK3_1 156 163 PF00069 0.431
MOD_GSK3_1 177 184 PF00069 0.356
MOD_GSK3_1 215 222 PF00069 0.323
MOD_GSK3_1 280 287 PF00069 0.435
MOD_GSK3_1 37 44 PF00069 0.469
MOD_GSK3_1 394 401 PF00069 0.407
MOD_GSK3_1 424 431 PF00069 0.405
MOD_GSK3_1 507 514 PF00069 0.493
MOD_GSK3_1 611 618 PF00069 0.436
MOD_GSK3_1 626 633 PF00069 0.295
MOD_GSK3_1 749 756 PF00069 0.462
MOD_GSK3_1 76 83 PF00069 0.697
MOD_GSK3_1 791 798 PF00069 0.350
MOD_GSK3_1 815 822 PF00069 0.318
MOD_GSK3_1 98 105 PF00069 0.763
MOD_N-GLC_1 220 225 PF02516 0.402
MOD_N-GLC_1 428 433 PF02516 0.428
MOD_N-GLC_1 597 602 PF02516 0.438
MOD_NEK2_1 128 133 PF00069 0.545
MOD_NEK2_1 181 186 PF00069 0.371
MOD_NEK2_1 267 272 PF00069 0.399
MOD_NEK2_1 322 327 PF00069 0.428
MOD_NEK2_1 394 399 PF00069 0.394
MOD_NEK2_1 428 433 PF00069 0.356
MOD_NEK2_1 495 500 PF00069 0.484
MOD_NEK2_1 511 516 PF00069 0.352
MOD_NEK2_1 749 754 PF00069 0.347
MOD_NEK2_1 766 771 PF00069 0.197
MOD_NEK2_1 792 797 PF00069 0.365
MOD_PIKK_1 116 122 PF00454 0.618
MOD_PIKK_1 400 406 PF00454 0.453
MOD_PIKK_1 749 755 PF00454 0.420
MOD_PIKK_1 768 774 PF00454 0.199
MOD_PIKK_1 86 92 PF00454 0.756
MOD_PKA_1 411 417 PF00069 0.351
MOD_PKA_1 424 430 PF00069 0.282
MOD_PKA_2 102 108 PF00069 0.759
MOD_PKA_2 322 328 PF00069 0.358
MOD_PKA_2 34 40 PF00069 0.563
MOD_PKA_2 411 417 PF00069 0.357
MOD_PKA_2 424 430 PF00069 0.268
MOD_PKA_2 611 617 PF00069 0.395
MOD_PKA_2 633 639 PF00069 0.290
MOD_PKA_2 646 652 PF00069 0.415
MOD_Plk_1 116 122 PF00069 0.596
MOD_Plk_1 220 226 PF00069 0.428
MOD_Plk_1 428 434 PF00069 0.412
MOD_Plk_1 597 603 PF00069 0.342
MOD_Plk_1 802 808 PF00069 0.403
MOD_Plk_1 838 844 PF00069 0.384
MOD_Plk_4 128 134 PF00069 0.499
MOD_Plk_4 181 187 PF00069 0.323
MOD_Plk_4 204 210 PF00069 0.324
MOD_Plk_4 316 322 PF00069 0.449
MOD_Plk_4 428 434 PF00069 0.399
MOD_Plk_4 47 53 PF00069 0.477
MOD_Plk_4 554 560 PF00069 0.410
MOD_Plk_4 661 667 PF00069 0.307
MOD_Plk_4 744 750 PF00069 0.311
MOD_Plk_4 833 839 PF00069 0.295
MOD_ProDKin_1 149 155 PF00069 0.423
MOD_ProDKin_1 160 166 PF00069 0.439
MOD_ProDKin_1 168 174 PF00069 0.409
MOD_ProDKin_1 284 290 PF00069 0.453
MOD_ProDKin_1 358 364 PF00069 0.288
MOD_ProDKin_1 436 442 PF00069 0.453
MOD_ProDKin_1 521 527 PF00069 0.454
MOD_ProDKin_1 76 82 PF00069 0.597
MOD_ProDKin_1 819 825 PF00069 0.295
TRG_DiLeu_BaEn_1 313 318 PF01217 0.323
TRG_DiLeu_BaLyEn_6 677 682 PF01217 0.386
TRG_DiLeu_BaLyEn_6 734 739 PF01217 0.384
TRG_DiLeu_BaLyEn_6 797 802 PF01217 0.422
TRG_DiLeu_BaLyEn_6 83 88 PF01217 0.765
TRG_DiLeu_BaLyEn_6 830 835 PF01217 0.295
TRG_ENDOCYTIC_2 329 332 PF00928 0.307
TRG_ENDOCYTIC_2 346 349 PF00928 0.307
TRG_ENDOCYTIC_2 453 456 PF00928 0.307
TRG_ENDOCYTIC_2 588 591 PF00928 0.342
TRG_ENDOCYTIC_2 828 831 PF00928 0.295
TRG_ER_diArg_1 257 260 PF00400 0.323
TRG_ER_diArg_1 322 324 PF00400 0.307
TRG_ER_diArg_1 424 426 PF00400 0.317
TRG_NES_CRM1_1 528 542 PF08389 0.428
TRG_Pf-PMV_PEXEL_1 179 183 PF00026 0.428
TRG_Pf-PMV_PEXEL_1 690 694 PF00026 0.428
TRG_Pf-PMV_PEXEL_1 815 819 PF00026 0.295

Homologs

Protein Taxonomy Sequence identity Coverage
A0A0N1I635 Leptomonas seymouri 72% 99%
A0A0S4J3M1 Bodo saltans 40% 98%
A0A1X0P0Y3 Trypanosomatidae 48% 100%
A0A3R7RTV6 Trypanosoma rangeli 46% 100%
A4HPV6 Leishmania braziliensis 83% 100%
A4IDL8 Leishmania infantum 100% 100%
D0A4A5 Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972) 46% 100%
E9ATM3 Leishmania mexicana (strain MHOM/GT/2001/U1103) 94% 100%
Q4Q0X5 Leishmania major 95% 100%
Q5R5J6 Pongo abelii 22% 96%
Q921G8 Mus musculus 21% 96%
Q9BSJ2 Homo sapiens 22% 96%
Q9C5H9 Arabidopsis thaliana 22% 100%
V5DLM1 Trypanosoma cruzi 47% 100%

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LeishMANIAdb - Server version: v0.0.2. - Database version: v0.0.1. - ChangeLog - © 2022-2025 Protein Bioinformatics Research Group, Institute of Enzymology, RCNS