Ribulose-phosphate 3-epimerase, putative

Quick info Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:

Gene product:

ribulose-phosphate 3-epimerase, putative

Species:

Leishmania donovani

UniProt:

A0A3S7X9N8_LEIDO

TriTrypDb:

LdBPK_353730.1 , LdCL_350042300 , LDHU3_35.4880

Length:

253

Localization

Secreted promastigote


Source	Evidence on protein	Close homologs
Cuervo et al.	no	yes: 0
Hassani et al.	no	yes: 0
Forrest at al. (metacyclic)	no	yes: 0
Forrest at al. (procyclic)	no	yes: 0
Silverman et al.	no	yes: 0
Pissara et al.	no	yes: 15

Secreted amastigote


Source	Evidence on protein	Close homologs
Pires et al.	no	yes: 0

Exosome


Source	Evidence on protein	Close homologs
Silverman et al.	no	yes: 0

Glycosome


Source	Evidence on protein	Close homologs
Jamdhade et al.	no	yes: 16

Predictions


Source	Evidence on protein	Close homologs
DeepLoc
SignalP6	no	yes: 0, no: 17
NetGPI	no	yes: 0, no: 17

Cellular components
Term	Name	Level	Count
GO:0005737	cytoplasm	2	17
GO:0110165	cellular anatomical entity	1	18
GO:0005654	nucleoplasm	2	1
GO:0005829	cytosol	2	2
GO:0032838	plasma membrane bounded cell projection cytoplasm	4	1
GO:0097014	ciliary plasm	5	1
GO:0099568	cytoplasmic region	3	1

Expansion

Sequence features

A0A3S7X9N8

Sequence

MSA

Disorder

Secondary

Topology

Domains

SignalP

GPI

Phosphorylations

ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: A0A3S7X9N8

Function

Biological processes
Term	Name	Level	Count
GO:0005975	carbohydrate metabolic process	3	18
GO:0008152	metabolic process	1	18
GO:0044238	primary metabolic process	2	18
GO:0071704	organic substance metabolic process	2	18
GO:0006091	generation of precursor metabolites and energy	3	9
GO:0009052	pentose-phosphate shunt, non-oxidative branch	4	2
GO:0009987	cellular process	1	9
GO:0044237	cellular metabolic process	2	9
GO:0044262	obsolete cellular carbohydrate metabolic process	3	2
GO:1901135	carbohydrate derivative metabolic process	3	9
GO:0006098	pentose-phosphate shunt	5	7
GO:0006139	nucleobase-containing compound metabolic process	3	7
GO:0006725	cellular aromatic compound metabolic process	3	7
GO:0006739	NADP metabolic process	7	7
GO:0006740	NADPH regeneration	4	7
GO:0006753	nucleoside phosphate metabolic process	4	7
GO:0006793	phosphorus metabolic process	3	7
GO:0006796	phosphate-containing compound metabolic process	4	7
GO:0006807	nitrogen compound metabolic process	2	7
GO:0009117	nucleotide metabolic process	5	7
GO:0019362	pyridine nucleotide metabolic process	5	7
GO:0019637	organophosphate metabolic process	3	7
GO:0034641	cellular nitrogen compound metabolic process	3	7
GO:0044281	small molecule metabolic process	2	7
GO:0046483	heterocycle metabolic process	3	7
GO:0046496	nicotinamide nucleotide metabolic process	6	7
GO:0051156	glucose 6-phosphate metabolic process	4	7
GO:0055086	nucleobase-containing small molecule metabolic process	3	7
GO:0072524	pyridine-containing compound metabolic process	4	7
GO:1901360	organic cyclic compound metabolic process	3	7
GO:1901564	organonitrogen compound metabolic process	3	7

Molecular functions
Term	Name	Level	Count
GO:0003824	catalytic activity	1	18
GO:0004750	D-ribulose-phosphate 3-epimerase activity	5	14
GO:0016853	isomerase activity	2	18
GO:0016854	racemase and epimerase activity	3	18
GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	4	18
GO:0005488	binding	1	9
GO:0043167	ion binding	2	9
GO:0043169	cation binding	3	9
GO:0046872	metal ion binding	4	9

Putative motif mimicry


Leishmania	From	To	Domain/Motif	Score
CLV_C14_Caspase3-7	60	64	PF00656	0.284
CLV_NRD_NRD_1	127	129	PF00675	0.355
CLV_NRD_NRD_1	229	231	PF00675	0.427
CLV_PCSK_SKI1_1	222	226	PF00082	0.329
DEG_ODPH_VHL_1	141	153	PF01847	0.233
DEG_SPOP_SBC_1	108	112	PF00917	0.134
DOC_CKS1_1	143	148	PF01111	0.261
DOC_MAPK_gen_1	17	26	PF00069	0.504
DOC_MAPK_gen_1	188	196	PF00069	0.301
DOC_MAPK_MEF2A_6	17	26	PF00069	0.469
DOC_MAPK_MEF2A_6	188	196	PF00069	0.290
DOC_SPAK_OSR1_1	175	179	PF12202	0.178
DOC_USP7_MATH_1	108	112	PF00917	0.299
DOC_USP7_MATH_1	22	26	PF00917	0.497
DOC_USP7_MATH_1	224	228	PF00917	0.465
DOC_USP7_MATH_1	75	79	PF00917	0.423
DOC_WW_Pin1_4	142	147	PF00397	0.235
DOC_WW_Pin1_4	25	30	PF00397	0.310
DOC_WW_Pin1_4	70	75	PF00397	0.348
LIG_Clathr_ClatBox_1	195	199	PF01394	0.429
LIG_DLG_GKlike_1	230	237	PF00625	0.355
LIG_FHA_1	204	210	PF00498	0.386
LIG_FHA_1	35	41	PF00498	0.289
LIG_FHA_2	143	149	PF00498	0.280
LIG_FHA_2	74	80	PF00498	0.376
LIG_FHA_2	85	91	PF00498	0.221
LIG_Integrin_isoDGR_2	15	17	PF01839	0.589
LIG_LIR_Gen_1	2	13	PF02991	0.518
LIG_LIR_Gen_1	53	62	PF02991	0.293
LIG_LIR_Nem_3	148	154	PF02991	0.406
LIG_LIR_Nem_3	2	8	PF02991	0.563
LIG_LIR_Nem_3	53	59	PF02991	0.292
LIG_LYPXL_yS_3	191	194	PF13949	0.310
LIG_PDZ_Class_1	248	253	PF00595	0.454
LIG_Pex14_1	101	105	PF04695	0.274
LIG_SH3_3	140	146	PF00018	0.261
LIG_SH3_3	92	98	PF00018	0.309
LIG_SUMO_SIM_anti_2	205	211	PF11976	0.276
LIG_SUMO_SIM_anti_2	42	49	PF11976	0.276
LIG_SUMO_SIM_par_1	22	28	PF11976	0.253
LIG_WRC_WIRS_1	102	107	PF05994	0.276
MOD_CK1_1	25	31	PF00069	0.327
MOD_CK1_1	73	79	PF00069	0.306
MOD_CK2_1	142	148	PF00069	0.372
MOD_GlcNHglycan	52	55	PF01048	0.380
MOD_N-GLC_1	68	73	PF02516	0.299
MOD_NEK2_1	237	242	PF00069	0.450
MOD_NEK2_1	8	13	PF00069	0.411
MOD_PKA_1	230	236	PF00069	0.458
MOD_PKA_2	237	243	PF00069	0.474
MOD_Plk_1	68	74	PF00069	0.299
MOD_Plk_1	8	14	PF00069	0.453
MOD_Plk_4	109	115	PF00069	0.400
MOD_Plk_4	22	28	PF00069	0.406
MOD_Plk_4	84	90	PF00069	0.318
MOD_ProDKin_1	142	148	PF00069	0.235
MOD_ProDKin_1	25	31	PF00069	0.310
MOD_ProDKin_1	70	76	PF00069	0.348
MOD_SUMO_rev_2	227	233	PF00179	0.514
TRG_ENDOCYTIC_2	191	194	PF00928	0.306
TRG_ER_diArg_1	187	190	PF00400	0.323
TRG_Pf-PMV_PEXEL_1	185	189	PF00026	0.334
TRG_Pf-PMV_PEXEL_1	38	42	PF00026	0.311
TRG_PTS1	250	253	PF00515	0.463

Homologs


Protein	Taxonomy	Sequence identity	Coverage
A0A0N0P388	Leptomonas seymouri	42%	100%
A0A0N0P4Y1	Leptomonas seymouri	68%	100%
A0A0S4JIP2	Bodo saltans	49%	100%
A0A1X0P1B6	Trypanosomatidae	45%	100%
A0A1X0P628	Trypanosomatidae	53%	100%
A0A3Q8IDT1	Leishmania donovani	44%	100%
A0A3R7KMA2	Trypanosoma rangeli	44%	100%
A0A3R7LEK7	Trypanosoma rangeli	57%	100%
A4HLL7	Leishmania braziliensis	42%	100%
A4HN39	Leishmania braziliensis	82%	100%
A4I928	Leishmania infantum	44%	100%
A4IBQ7	Leishmania infantum	100%	100%
A9MZG7	Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)	29%	100%
C9ZN91	Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972)	54%	100%
D0A531	Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972)	46%	100%
E9AFJ2	Leishmania major	93%	100%
E9B3Z3	Leishmania mexicana (strain MHOM/GT/2001/U1103)	43%	100%
O14105	Schizosaccharomyces pombe (strain 972 / ATCC 24843)	43%	100%
O34557	Bacillus subtilis (strain 168)	36%	100%
O66107	Treponema pallidum (strain Nichols)	35%	100%
O67098	Aquifex aeolicus (strain VF5)	28%	100%
O84123	Chlamydia trachomatis (strain D/UW-3/Cx)	31%	100%
P0AG07	Escherichia coli (strain K12)	33%	100%
P0AG08	Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)	33%	100%
P0AG09	Escherichia coli O157:H7	33%	100%
P0AG10	Shigella flexneri	33%	100%
P32719	Escherichia coli (strain K12)	34%	100%
P39362	Escherichia coli (strain K12)	31%	100%
P40117	Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)	33%	100%
P44756	Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)	33%	100%
P45455	Serratia marcescens	35%	100%
P46969	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)	39%	100%
P51012	Rhodobacter capsulatus	36%	100%
P51013	Rhodospirillum rubrum	32%	100%
P56188	Helicobacter pylori (strain ATCC 700392 / 26695)	32%	100%
P57603	Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)	33%	100%
P65761	Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)	39%	100%
P74061	Synechocystis sp. (strain PCC 6803 / Kazusa)	36%	100%
P9WI50	Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)	39%	100%
P9WI51	Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)	39%	100%
Q04539	Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)	32%	100%
Q2QD12	Homo sapiens	39%	100%
Q43157	Spinacia oleracea	33%	89%
Q43843	Solanum tuberosum	34%	90%
Q4Q431	Leishmania major	43%	100%
Q57HD7	Salmonella choleraesuis (strain SC-B67)	29%	100%
Q58093	Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)	30%	100%
Q5PJE1	Salmonella paratyphi A (strain ATCC 9150 / SARB42)	29%	100%
Q5R5Y2	Pongo abelii	41%	100%
Q6FL81	Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)	37%	100%
Q755M2	Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)	38%	100%
Q89A59	Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)	30%	100%
Q8K940	Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)	30%	100%
Q8SRP6	Encephalitozoon cuniculi (strain GB-M1)	29%	100%
Q8VEE0	Mus musculus	41%	100%
Q8Z2Y1	Salmonella typhi	29%	100%
Q8ZKP8	Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)	29%	100%
Q96AT9	Homo sapiens	41%	100%
Q9CCP9	Mycobacterium leprae (strain TN)	39%	100%
Q9L0Z5	Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)	35%	100%
Q9PKR7	Chlamydia muridarum (strain MoPn / Nigg)	33%	100%
Q9SAU2	Arabidopsis thaliana	33%	90%
Q9SE42	Oryza sativa subsp. japonica	41%	100%
Q9Z8Z9	Chlamydia pneumoniae	31%	100%
Q9ZJ75	Helicobacter pylori (strain J99 / ATCC 700824)	32%	100%
Q9ZTP5	Oryza sativa subsp. japonica	34%	92%
V5BCV0	Trypanosoma cruzi	55%	100%
V5BHA6	Trypanosoma cruzi	46%	100%