LeishMANIAdb
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RNA re-capping enzyme, cytoplasmic, putative

Quick info Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:
RNA re-capping enzyme, cytoplasmic, putative
Gene product:
RNA re-capping enzyme, cytoplasmic, putative
Species:
Leishmania donovani
UniProt:
A0A3S7X948_LEIDO
TriTrypDb:
LdBPK_351700.1 , LdCL_350021900 , LDHU3_35.2240
Length:
362

Localization

Secreted promastigote
Source Evidence on protein Close homologs
Cuervo et al. no yes: 0
Hassani et al. no yes: 0
Forrest at al. (metacyclic) no yes: 0
Forrest at al. (procyclic) no yes: 0
Silverman et al. no yes: 0
Pissara et al. no yes: 0
Secreted amastigote
Source Evidence on protein Close homologs
Pires et al. no yes: 0
Exosome
Source Evidence on protein Close homologs
Silverman et al. no yes: 0
Glycosome
Source Evidence on protein Close homologs
Jamdhade et al. no yes: 0
Predictions
Source Evidence on protein Close homologs
DeepLoc
SignalP6 no yes: 0, no: 11
NetGPI no yes: 0, no: 11
Cellular components
Term Name Level Count
GO:0005730 nucleolus 5 12
GO:0043226 organelle 2 12
GO:0043228 non-membrane-bounded organelle 3 12
GO:0043229 intracellular organelle 3 12
GO:0043232 intracellular non-membrane-bounded organelle 4 12
GO:0110165 cellular anatomical entity 1 12
GO:0005737 cytoplasm 2 1

Expansion

Sequence features

A0A3S7X948
Sequence
MSA
Disorder
Secondary
Topology
Domains
SignalP
GPI
Phosphorylations
ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: A0A3S7X948

Function

Biological processes
Term Name Level Count
GO:0006139 nucleobase-containing compound metabolic process 3 12
GO:0006396 RNA processing 6 12
GO:0006725 cellular aromatic compound metabolic process 3 12
GO:0006807 nitrogen compound metabolic process 2 12
GO:0008152 metabolic process 1 12
GO:0009987 cellular process 1 12
GO:0016070 RNA metabolic process 5 12
GO:0022613 ribonucleoprotein complex biogenesis 4 11
GO:0034641 cellular nitrogen compound metabolic process 3 12
GO:0042254 ribosome biogenesis 5 11
GO:0043170 macromolecule metabolic process 3 12
GO:0044085 cellular component biogenesis 3 11
GO:0044237 cellular metabolic process 2 12
GO:0044238 primary metabolic process 2 12
GO:0046483 heterocycle metabolic process 3 12
GO:0071704 organic substance metabolic process 2 12
GO:0071840 cellular component organization or biogenesis 2 11
GO:0090304 nucleic acid metabolic process 4 12
GO:1901360 organic cyclic compound metabolic process 3 12
GO:0000469 cleavage involved in rRNA processing 7 1
GO:0000478 endonucleolytic cleavage involved in rRNA processing 8 1
GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 9 1
GO:0036260 RNA capping 7 1
GO:0090305 nucleic acid phosphodiester bond hydrolysis 5 1
GO:0090501 RNA phosphodiester bond hydrolysis 6 1
GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic 7 1
Molecular functions
Term Name Level Count
GO:0003824 catalytic activity 1 12
GO:0004484 mRNA guanylyltransferase activity 5 3
GO:0008192 RNA guanylyltransferase activity 4 3
GO:0016740 transferase activity 2 3
GO:0016772 transferase activity, transferring phosphorus-containing groups 3 3
GO:0016779 nucleotidyltransferase activity 4 3
GO:0070568 guanylyltransferase activity 5 3
GO:0140098 catalytic activity, acting on RNA 3 6
GO:0140640 catalytic activity, acting on a nucleic acid 2 6
GO:0003963 RNA-3'-phosphate cyclase activity 3 4
GO:0004518 nuclease activity 4 1
GO:0004519 endonuclease activity 5 1
GO:0004521 RNA endonuclease activity 5 1
GO:0004540 RNA nuclease activity 4 1
GO:0009975 cyclase activity 2 4
GO:0016301 kinase activity 4 1
GO:0016787 hydrolase activity 2 1
GO:0016788 hydrolase activity, acting on ester bonds 3 1
GO:0016874 ligase activity 2 4
GO:0016886 ligase activity, forming phosphoric ester bonds 3 4
GO:0019205 nucleobase-containing compound kinase activity 5 1

Putative motif mimicry

Leishmania From To Domain/Motif Score
CLV_C14_Caspase3-7 218 222 PF00656 0.462
CLV_NRD_NRD_1 147 149 PF00675 0.250
CLV_NRD_NRD_1 166 168 PF00675 0.258
CLV_NRD_NRD_1 180 182 PF00675 0.267
CLV_PCSK_FUR_1 178 182 PF00082 0.256
CLV_PCSK_KEX2_1 147 149 PF00082 0.250
CLV_PCSK_KEX2_1 166 168 PF00082 0.317
CLV_PCSK_KEX2_1 180 182 PF00082 0.256
CLV_PCSK_KEX2_1 21 23 PF00082 0.324
CLV_PCSK_KEX2_1 266 268 PF00082 0.257
CLV_PCSK_PC1ET2_1 21 23 PF00082 0.338
CLV_PCSK_PC1ET2_1 266 268 PF00082 0.257
CLV_PCSK_PC7_1 176 182 PF00082 0.256
CLV_PCSK_SKI1_1 127 131 PF00082 0.267
CLV_PCSK_SKI1_1 166 170 PF00082 0.277
CLV_PCSK_SKI1_1 198 202 PF00082 0.252
CLV_PCSK_SKI1_1 87 91 PF00082 0.281
DEG_Nend_Nbox_1 1 3 PF02207 0.388
DEG_SPOP_SBC_1 240 244 PF00917 0.467
DOC_ANK_TNKS_1 147 154 PF00023 0.542
DOC_CKS1_1 68 73 PF01111 0.542
DOC_CYCLIN_yClb1_LxF_4 43 49 PF00134 0.456
DOC_MAPK_gen_1 178 187 PF00069 0.467
DOC_MAPK_gen_1 266 273 PF00069 0.467
DOC_MAPK_MEF2A_6 209 216 PF00069 0.478
DOC_PP1_RVXF_1 106 112 PF00149 0.517
DOC_PP1_RVXF_1 181 188 PF00149 0.460
DOC_PP2B_LxvP_1 98 101 PF13499 0.456
DOC_PP4_FxxP_1 336 339 PF00568 0.593
DOC_USP7_MATH_1 186 190 PF00917 0.542
DOC_USP7_MATH_1 332 336 PF00917 0.547
DOC_WW_Pin1_4 257 262 PF00397 0.543
DOC_WW_Pin1_4 294 299 PF00397 0.467
DOC_WW_Pin1_4 67 72 PF00397 0.542
LIG_14-3-3_CanoR_1 108 112 PF00244 0.497
LIG_14-3-3_CanoR_1 127 132 PF00244 0.456
LIG_14-3-3_CanoR_1 198 207 PF00244 0.456
LIG_14-3-3_CanoR_1 51 58 PF00244 0.481
LIG_14-3-3_CanoR_1 87 92 PF00244 0.456
LIG_Clathr_ClatBox_1 317 321 PF01394 0.517
LIG_EH1_1 12 20 PF00400 0.456
LIG_EH1_1 285 293 PF00400 0.456
LIG_FHA_1 241 247 PF00498 0.520
LIG_FHA_1 341 347 PF00498 0.401
LIG_FHA_1 88 94 PF00498 0.517
LIG_FHA_2 113 119 PF00498 0.456
LIG_FHA_2 170 176 PF00498 0.542
LIG_FHA_2 189 195 PF00498 0.542
LIG_FHA_2 216 222 PF00498 0.451
LIG_LIR_Apic_2 333 339 PF02991 0.568
LIG_LIR_Gen_1 130 139 PF02991 0.456
LIG_LIR_Gen_1 42 52 PF02991 0.456
LIG_LIR_Nem_3 130 136 PF02991 0.456
LIG_LIR_Nem_3 232 237 PF02991 0.456
LIG_LIR_Nem_3 303 309 PF02991 0.476
LIG_LIR_Nem_3 321 326 PF02991 0.451
LIG_LIR_Nem_3 42 48 PF02991 0.456
LIG_NRBOX 288 294 PF00104 0.467
LIG_Pex14_1 133 137 PF04695 0.456
LIG_SH2_CRK 234 238 PF00017 0.456
LIG_SH2_STAT5 215 218 PF00017 0.456
LIG_SH2_STAT5 323 326 PF00017 0.467
LIG_SH2_STAT5 91 94 PF00017 0.456
LIG_SH3_3 251 257 PF00018 0.484
LIG_SH3_3 336 342 PF00018 0.514
LIG_Sin3_3 96 103 PF02671 0.481
LIG_SUMO_SIM_anti_2 315 322 PF11976 0.456
LIG_SUMO_SIM_par_1 235 244 PF11976 0.456
LIG_UBA3_1 97 104 PF00899 0.497
MOD_CK1_1 107 113 PF00069 0.517
MOD_CK1_1 17 23 PF00069 0.456
MOD_CK1_1 170 176 PF00069 0.513
MOD_CK1_1 250 256 PF00069 0.481
MOD_CK1_1 312 318 PF00069 0.476
MOD_CK1_1 54 60 PF00069 0.517
MOD_CK2_1 112 118 PF00069 0.467
MOD_CK2_1 169 175 PF00069 0.535
MOD_CK2_1 294 300 PF00069 0.460
MOD_Cter_Amidation 264 267 PF01082 0.267
MOD_GlcNHglycan 169 172 PF01048 0.310
MOD_GlcNHglycan 231 234 PF01048 0.256
MOD_GlcNHglycan 309 312 PF01048 0.261
MOD_GlcNHglycan 314 317 PF01048 0.242
MOD_GlcNHglycan 53 56 PF01048 0.287
MOD_GSK3_1 166 173 PF00069 0.469
MOD_GSK3_1 341 348 PF00069 0.390
MOD_GSK3_1 50 57 PF00069 0.494
MOD_GSK3_1 58 65 PF00069 0.356
MOD_N-GLC_1 63 68 PF02516 0.294
MOD_NEK2_1 309 314 PF00069 0.492
MOD_NEK2_1 319 324 PF00069 0.398
MOD_NEK2_1 4 9 PF00069 0.467
MOD_NEK2_1 75 80 PF00069 0.478
MOD_NEK2_2 122 127 PF00069 0.380
MOD_PIKK_1 112 118 PF00454 0.456
MOD_PIKK_1 247 253 PF00454 0.449
MOD_PIKK_1 82 88 PF00454 0.542
MOD_PKA_1 166 172 PF00069 0.493
MOD_PKA_2 107 113 PF00069 0.497
MOD_PKA_2 166 172 PF00069 0.514
MOD_PKA_2 229 235 PF00069 0.521
MOD_PKA_2 24 30 PF00069 0.482
MOD_PKA_2 50 56 PF00069 0.449
MOD_Plk_1 299 305 PF00069 0.456
MOD_Plk_1 332 338 PF00069 0.459
MOD_Plk_1 63 69 PF00069 0.499
MOD_Plk_4 14 20 PF00069 0.456
MOD_Plk_4 319 325 PF00069 0.497
MOD_Plk_4 342 348 PF00069 0.354
MOD_Plk_4 5 11 PF00069 0.456
MOD_Plk_4 87 93 PF00069 0.451
MOD_ProDKin_1 257 263 PF00069 0.543
MOD_ProDKin_1 294 300 PF00069 0.467
MOD_ProDKin_1 67 73 PF00069 0.542
MOD_SUMO_for_1 203 206 PF00179 0.542
MOD_SUMO_rev_2 159 165 PF00179 0.542
TRG_DiLeu_BaEn_1 206 211 PF01217 0.542
TRG_DiLeu_BaEn_1 5 10 PF01217 0.542
TRG_DiLeu_BaEn_1 94 99 PF01217 0.456
TRG_ENDOCYTIC_2 234 237 PF00928 0.456
TRG_ENDOCYTIC_2 323 326 PF00928 0.467
TRG_ER_diArg_1 146 148 PF00400 0.456
TRG_ER_diArg_1 165 167 PF00400 0.517
TRG_ER_diArg_1 176 179 PF00400 0.456
TRG_ER_diArg_1 180 183 PF00400 0.456
TRG_ER_diLys_1 359 362 PF00400 0.475
TRG_NES_CRM1_1 287 300 PF08389 0.456

Homologs

Protein Taxonomy Sequence identity Coverage
A0A0N1I4D4 Leptomonas seymouri 91% 100%
A0A0S4KLE5 Bodo saltans 68% 100%
A0A1X0P619 Trypanosomatidae 71% 100%
A0A3R7KQG1 Trypanosoma rangeli 72% 100%
A0B532 Methanothrix thermoacetophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) 26% 100%
A1RSJ7 Pyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3) 27% 100%
A2BN21 Hyperthermus butylicus (strain DSM 5456 / JCM 9403 / PLM1-5) 28% 100%
A3DN24 Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1) 25% 100%
A3MXQ7 Pyrobaculum calidifontis (strain DSM 21063 / JCM 11548 / VA1) 29% 100%
A4HMJ1 Leishmania braziliensis 94% 100%
A4IB71 Leishmania infantum 99% 100%
A4XRJ0 Pseudomonas mendocina (strain ymp) 25% 100%
A4YEC3 Metallosphaera sedula (strain ATCC 51363 / DSM 5348 / JCM 9185 / NBRC 15509 / TH2) 25% 100%
A8A9W2 Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) 27% 100%
A8MAV7 Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) 26% 100%
B1L6E9 Korarchaeum cryptofilum (strain OPF8) 25% 100%
B1YDJ1 Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / NBRC 100436 / V24Sta) 27% 100%
B2IWJ8 Nostoc punctiforme (strain ATCC 29133 / PCC 73102) 25% 100%
B6YSJ5 Thermococcus onnurineus (strain NA1) 23% 100%
B7KCF3 Gloeothece citriformis (strain PCC 7424) 24% 100%
B8D680 Desulfurococcus amylolyticus (strain DSM 18924 / JCM 16383 / VKM B-2413 / 1221n) 21% 100%
C3MKC1 Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) 25% 100%
C3MU91 Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) 25% 100%
C3N179 Sulfolobus islandicus (strain M.16.27) 25% 100%
C3N969 Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) 25% 100%
C3NMT8 Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) 25% 100%
C4KKE6 Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) 25% 100%
C5A2A3 Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) 23% 100%
C6A4N4 Thermococcus sibiricus (strain DSM 12597 / MM 739) 20% 100%
C9ZZI0 Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972) 73% 100%
E9AEZ2 Leishmania major 99% 100%
E9B648 Leishmania mexicana (strain MHOM/GT/2001/U1103) 97% 100%
O00442 Homo sapiens 26% 99%
O15746 Dictyostelium discoideum 22% 84%
O27937 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) 24% 100%
O28837 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) 25% 100%
O59198 Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) 28% 100%
O66884 Aquifex aeolicus (strain VF5) 23% 100%
O77264 Drosophila melanogaster 25% 100%
P56175 Drosophila melanogaster 32% 94%
Q08096 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) 28% 99%
Q09870 Schizosaccharomyces pombe (strain 972 / ATCC 24843) 33% 100%
Q12V70 Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) 23% 100%
Q23400 Caenorhabditis elegans 32% 96%
Q2HJ88 Bos taurus 26% 99%
Q2KHX8 Bos taurus 34% 97%
Q2Y720 Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849 / C 71) 22% 100%
Q3M6L1 Trichormus variabilis (strain ATCC 29413 / PCC 7937) 27% 100%
Q46DV9 Methanosarcina barkeri (strain Fusaro / DSM 804) 24% 100%
Q4JB78 Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) 22% 100%
Q4R3J0 Macaca fascicularis 26% 99%
Q54S38 Dictyostelium discoideum 36% 98%
Q5JIQ0 Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) 23% 100%
Q5R7P3 Pongo abelii 24% 99%
Q60335 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) 23% 100%
Q609M1 Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) 25% 100%
Q8PXC4 Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) 22% 100%
Q8TH85 Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) 24% 100%
Q8TZC9 Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) 24% 100%
Q8U0N7 Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) 24% 100%
Q8YVS3 Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) 27% 100%
Q8ZST4 Pyrobaculum aerophilum (strain ATCC 51768 / DSM 7523 / JCM 9630 / CIP 104966 / NBRC 100827 / IM2) 30% 100%
Q974U1 Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) 27% 100%
Q97W04 Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) 23% 100%
Q9C578 Arabidopsis thaliana 35% 97%
Q9D7H3 Mus musculus 26% 99%
Q9JJT0 Mus musculus 35% 97%
Q9V0Z6 Pyrococcus abyssi (strain GE5 / Orsay) 27% 100%
Q9Y2P8 Homo sapiens 34% 97%
Q9YES0 Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) 24% 100%
V5DKG4 Trypanosoma cruzi 71% 100%

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LeishMANIAdb - Server version: v0.0.2. - Database version: v0.0.1. - ChangeLog - © 2022-2025 Protein Bioinformatics Research Group, Institute of Enzymology, RCNS