LeishMANIAdb
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RNA recognition motif family protein

Quick info Annotations Function or PPIs Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:
RNA recognition motif family protein
Gene product:
Double RNA binding domain protein 7
Species:
Leishmania donovani
UniProt:
A0A3S7X8L4_LEIDO
TriTrypDb:
LdBPK_344190.1 , LdCL_340052000 , LDHU3_34.6570
Length:
390

Annotations

Annotations by Jardim et al.

Nucleic acid binding, RNA-binding -like

Localization

Secreted promastigote
Source Evidence on protein Close homologs
Cuervo et al. no yes: 0
Hassani et al. no yes: 0
Forrest at al. (metacyclic) no yes: 0
Forrest at al. (procyclic) no yes: 0
Silverman et al. no yes: 0
Pissara et al. no yes: 0
Secreted amastigote
Source Evidence on protein Close homologs
Pires et al. no yes: 0
Exosome
Source Evidence on protein Close homologs
Silverman et al. no yes: 0
Glycosome
Source Evidence on protein Close homologs
Jamdhade et al. no yes: 0
Predictions
Source Evidence on protein Close homologs
DeepLoc
SignalP6 no yes: 0, no: 9
NetGPI no yes: 0, no: 9
Cellular components
Term Name Level Count
GO:0005737 cytoplasm 2 1
GO:0031974 membrane-enclosed lumen 2 1
GO:0031981 nuclear lumen 5 1
GO:0032838 plasma membrane bounded cell projection cytoplasm 4 1
GO:0032991 protein-containing complex 1 1
GO:0043233 organelle lumen 3 1
GO:0070013 intracellular organelle lumen 4 1
GO:0097014 ciliary plasm 5 1
GO:0099568 cytoplasmic region 3 1
GO:0110165 cellular anatomical entity 1 1
GO:1990904 ribonucleoprotein complex 2 1

Expansion

Sequence features

A0A3S7X8L4
Sequence
MSA
Disorder
Secondary
Topology
Domains
SignalP
GPI
Phosphorylations
ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: A0A3S7X8L4

Function

Could not find GO biological_process term for this entry.
Molecular functions
Term Name Level Count
GO:0003676 nucleic acid binding 3 10
GO:0003723 RNA binding 4 10
GO:0005488 binding 1 10
GO:0097159 organic cyclic compound binding 2 10
GO:1901363 heterocyclic compound binding 2 10

Putative motif mimicry

Leishmania From To Domain/Motif Score
CLV_NRD_NRD_1 90 92 PF00675 0.282
CLV_PCSK_KEX2_1 90 92 PF00082 0.282
CLV_PCSK_SKI1_1 149 153 PF00082 0.335
CLV_PCSK_SKI1_1 335 339 PF00082 0.503
CLV_PCSK_SKI1_1 361 365 PF00082 0.574
CLV_PCSK_SKI1_1 39 43 PF00082 0.736
CLV_PCSK_SKI1_1 77 81 PF00082 0.335
CLV_Separin_Metazoa 332 336 PF03568 0.590
DEG_Nend_UBRbox_3 1 3 PF02207 0.652
DEG_SCF_FBW7_1 277 283 PF00400 0.677
DEG_SCF_FBW7_1 40 46 PF00400 0.583
DOC_CKS1_1 106 111 PF01111 0.587
DOC_CKS1_1 277 282 PF01111 0.651
DOC_CKS1_1 40 45 PF01111 0.636
DOC_MAPK_gen_1 80 89 PF00069 0.460
DOC_MAPK_MEF2A_6 12 19 PF00069 0.609
DOC_PP4_FxxP_1 251 254 PF00568 0.722
DOC_PP4_FxxP_1 324 327 PF00568 0.542
DOC_USP7_MATH_1 191 195 PF00917 0.485
DOC_USP7_MATH_1 43 47 PF00917 0.533
DOC_WW_Pin1_4 105 110 PF00397 0.488
DOC_WW_Pin1_4 150 155 PF00397 0.521
DOC_WW_Pin1_4 229 234 PF00397 0.602
DOC_WW_Pin1_4 237 242 PF00397 0.631
DOC_WW_Pin1_4 243 248 PF00397 0.656
DOC_WW_Pin1_4 249 254 PF00397 0.476
DOC_WW_Pin1_4 257 262 PF00397 0.384
DOC_WW_Pin1_4 276 281 PF00397 0.521
DOC_WW_Pin1_4 33 38 PF00397 0.636
DOC_WW_Pin1_4 39 44 PF00397 0.587
LIG_APCC_ABBA_1 119 124 PF00400 0.490
LIG_EVH1_1 276 280 PF00568 0.660
LIG_FHA_1 184 190 PF00498 0.482
LIG_FHA_1 285 291 PF00498 0.691
LIG_FHA_1 328 334 PF00498 0.554
LIG_FHA_1 378 384 PF00498 0.514
LIG_FHA_1 40 46 PF00498 0.549
LIG_FHA_1 74 80 PF00498 0.462
LIG_FHA_2 55 61 PF00498 0.525
LIG_GBD_Chelix_1 369 377 PF00786 0.512
LIG_LIR_Apic_2 321 327 PF02991 0.533
LIG_LIR_Nem_3 153 158 PF02991 0.442
LIG_LIR_Nem_3 174 179 PF02991 0.451
LIG_LIR_Nem_3 246 251 PF02991 0.614
LIG_LIR_Nem_3 340 344 PF02991 0.533
LIG_LIR_Nem_3 65 70 PF02991 0.535
LIG_PDZ_Class_2 385 390 PF00595 0.470
LIG_PTB_Apo_2 78 85 PF02174 0.535
LIG_RPA_C_Fungi 86 98 PF08784 0.246
LIG_SH2_CRK 155 159 PF00017 0.418
LIG_SH2_CRK 296 300 PF00017 0.582
LIG_SH2_STAP1 208 212 PF00017 0.461
LIG_SH2_STAP1 303 307 PF00017 0.618
LIG_SH3_3 272 278 PF00018 0.667
LIG_SH3_3 305 311 PF00018 0.621
LIG_SH3_3 37 43 PF00018 0.654
LIG_TRAF2_1 181 184 PF00917 0.375
LIG_TRAF2_1 25 28 PF00917 0.790
LIG_UBA3_1 164 172 PF00899 0.343
LIG_WW_1 300 303 PF00397 0.652
MOD_CDC14_SPxK_1 36 39 PF00782 0.692
MOD_CDK_SPxK_1 33 39 PF00069 0.697
MOD_CDK_SPxxK_3 229 236 PF00069 0.615
MOD_CK1_1 196 202 PF00069 0.528
MOD_CK1_1 243 249 PF00069 0.685
MOD_CK2_1 178 184 PF00069 0.335
MOD_CK2_1 337 343 PF00069 0.499
MOD_GlcNHglycan 173 176 PF01048 0.333
MOD_GlcNHglycan 20 23 PF01048 0.758
MOD_GlcNHglycan 210 213 PF01048 0.601
MOD_GlcNHglycan 27 31 PF01048 0.668
MOD_GlcNHglycan 303 306 PF01048 0.633
MOD_GlcNHglycan 324 327 PF01048 0.464
MOD_GlcNHglycan 93 96 PF01048 0.318
MOD_GSK3_1 239 246 PF00069 0.699
MOD_GSK3_1 249 256 PF00069 0.686
MOD_GSK3_1 26 33 PF00069 0.665
MOD_GSK3_1 276 283 PF00069 0.587
MOD_GSK3_1 373 380 PF00069 0.537
MOD_GSK3_1 39 46 PF00069 0.580
MOD_N-GLC_1 30 35 PF02516 0.694
MOD_N-GLC_1 351 356 PF02516 0.588
MOD_N-GLC_1 373 378 PF02516 0.479
MOD_N-GLC_1 99 104 PF02516 0.343
MOD_NEK2_1 115 120 PF00069 0.433
MOD_NEK2_1 322 327 PF00069 0.460
MOD_NEK2_1 337 342 PF00069 0.455
MOD_NEK2_1 373 378 PF00069 0.452
MOD_PIKK_1 102 108 PF00454 0.516
MOD_PIKK_1 178 184 PF00454 0.388
MOD_PIKK_1 284 290 PF00454 0.674
MOD_PKA_2 191 197 PF00069 0.343
MOD_PKB_1 359 367 PF00069 0.529
MOD_Plk_1 99 105 PF00069 0.339
MOD_Plk_2-3 193 199 PF00069 0.610
MOD_Plk_4 110 116 PF00069 0.571
MOD_Plk_4 253 259 PF00069 0.637
MOD_Plk_4 373 379 PF00069 0.459
MOD_ProDKin_1 105 111 PF00069 0.483
MOD_ProDKin_1 150 156 PF00069 0.398
MOD_ProDKin_1 229 235 PF00069 0.604
MOD_ProDKin_1 237 243 PF00069 0.628
MOD_ProDKin_1 249 255 PF00069 0.477
MOD_ProDKin_1 257 263 PF00069 0.385
MOD_ProDKin_1 276 282 PF00069 0.524
MOD_ProDKin_1 33 39 PF00069 0.634
MOD_SUMO_for_1 25 28 PF00179 0.792
MOD_SUMO_rev_2 199 209 PF00179 0.368
TRG_DiLeu_BaEn_1 160 165 PF01217 0.418
TRG_DiLeu_BaEn_1 332 337 PF01217 0.586
TRG_ENDOCYTIC_2 155 158 PF00928 0.410
TRG_ENDOCYTIC_2 248 251 PF00928 0.641
TRG_ENDOCYTIC_2 296 299 PF00928 0.608
TRG_ENDOCYTIC_2 341 344 PF00928 0.427
TRG_ENDOCYTIC_2 67 70 PF00928 0.388
TRG_ER_diArg_1 358 361 PF00400 0.507
TRG_ER_diArg_1 89 91 PF00400 0.313
TRG_Pf-PMV_PEXEL_1 137 141 PF00026 0.318

Homologs

Protein Taxonomy Sequence identity Coverage
A0A0N1IHL9 Leptomonas seymouri 83% 100%
A0A1X0P4T3 Trypanosomatidae 25% 70%
A0A1X0PA83 Trypanosomatidae 57% 100%
A0A3R7NF39 Trypanosoma rangeli 24% 67%
A4HBG2 Leishmania braziliensis 89% 100%
A4IAK8 Leishmania infantum 100% 100%
C9ZLN3 Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972) 53% 100%
C9ZYQ8 Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972) 25% 70%
E9B5N3 Leishmania mexicana (strain MHOM/GT/2001/U1103) 98% 100%
Q4Q285 Leishmania major 97% 100%
Q6FKG4 Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) 26% 67%
Q74ZS6 Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) 28% 67%
V5BW06 Trypanosoma cruzi 53% 97%
V5DUJ1 Trypanosoma cruzi 25% 71%

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LeishMANIAdb - Server version: v0.0.2. - Database version: v0.0.1. - ChangeLog - © 2022-2025 Protein Bioinformatics Research Group, Institute of Enzymology, RCNS