Emp24/gp25L/p24 family/GOLD, putative

Quick info Annotations Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:

Gene product:

emp24/gp25L/p24 family/GOLD, putative

Species:

Leishmania donovani

UniProt:

A0A3S7X4G7_LEIDO

TriTrypDb:

LdBPK_311110.1 , LdCL_310017900 , LDHU3_31.1840

Length:

215

Annotations

LeishMANIAdb annotations

Related to other eukaryotic COPII adaptors. Likely involved in ER to Golgi transport.. A Leishmaniid-specific subgroup of these proteins is missing the SigP (unclear topology and function). Localization: ER (by homology) / Golgi (by homology)

Annotations by Jardim et al.

Transporters, Uncharacterized

Localization

Secreted promastigote


Source	Evidence on protein	Close homologs
Cuervo et al.	no	yes: 0
Hassani et al.	no	yes: 0
Forrest at al. (metacyclic)	no	yes: 0
Forrest at al. (procyclic)	no	yes: 0
Silverman et al.	no	yes: 0
Pissara et al.	no	yes: 5

Secreted amastigote


Source	Evidence on protein	Close homologs
Pires et al.	no	yes: 0

Exosome


Source	Evidence on protein	Close homologs
Silverman et al.	no	yes: 0

Glycosome


Source	Evidence on protein	Close homologs
Jamdhade et al.	no	yes: 8

Predictions


Source	Evidence on protein	Close homologs
DeepLoc
SignalP6	no	yes: 14, no: 7
NetGPI	no	yes: 0, no: 21

Cellular components
Term	Name	Level	Count
GO:0016020	membrane	2	22
GO:0110165	cellular anatomical entity	1	22
GO:0005783	endoplasmic reticulum	5	2
GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	5	2
GO:0005794	Golgi apparatus	5	2
GO:0030134	COPII-coated ER to Golgi transport vesicle	8	2
GO:0030135	coated vesicle	7	2
GO:0031410	cytoplasmic vesicle	6	2
GO:0031982	vesicle	4	2
GO:0043226	organelle	2	2
GO:0043227	membrane-bounded organelle	3	2
GO:0043229	intracellular organelle	3	2
GO:0043231	intracellular membrane-bounded organelle	4	2
GO:0097708	intracellular vesicle	5	2

Expansion

Sequence features

A0A3S7X4G7

Sequence

MSA

Disorder

Secondary

Topology

Domains

SignalP

GPI

Phosphorylations

ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: A0A3S7X4G7

Function

Biological processes
Term	Name	Level	Count
GO:0006810	transport	3	2
GO:0006886	intracellular protein transport	4	2
GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	4	2
GO:0006996	organelle organization	4	2
GO:0007030	Golgi organization	5	2
GO:0008104	protein localization	4	2
GO:0009987	cellular process	1	2
GO:0015031	protein transport	4	2
GO:0016043	cellular component organization	3	2
GO:0016192	vesicle-mediated transport	4	2
GO:0033036	macromolecule localization	2	2
GO:0045184	establishment of protein localization	3	2
GO:0046907	intracellular transport	3	2
GO:0048193	Golgi vesicle transport	5	2
GO:0051179	localization	1	2
GO:0051234	establishment of localization	2	2
GO:0051641	cellular localization	2	2
GO:0051649	establishment of localization in cell	3	2
GO:0070727	cellular macromolecule localization	3	2
GO:0071702	organic substance transport	4	2
GO:0071705	nitrogen compound transport	4	2
GO:0071840	cellular component organization or biogenesis	2	2

Could not find GO molecular_function term for this entry.

Putative motif mimicry


Leishmania	From	To	Domain/Motif	Score
CLV_NRD_NRD_1	206	208	PF00675	0.262
CLV_PCSK_KEX2_1	206	208	PF00082	0.247
CLV_PCSK_SKI1_1	206	210	PF00082	0.201
DEG_Nend_UBRbox_1	1	4	PF02207	0.565
DOC_CYCLIN_RxL_1	203	213	PF00134	0.438
DOC_MAPK_gen_1	102	110	PF00069	0.288
DOC_MAPK_MEF2A_6	102	110	PF00069	0.196
DOC_MAPK_MEF2A_6	18	25	PF00069	0.326
DOC_PP1_RVXF_1	118	125	PF00149	0.227
DOC_PP1_RVXF_1	180	187	PF00149	0.253
DOC_PP1_RVXF_1	55	62	PF00149	0.291
DOC_PP1_RVXF_1	86	93	PF00149	0.339
DOC_PP4_FxxP_1	95	98	PF00568	0.306
LIG_14-3-3_CanoR_1	127	131	PF00244	0.340
LIG_APCC_ABBA_1	63	68	PF00400	0.301
LIG_BRCT_BRCA1_1	25	29	PF00533	0.426
LIG_FHA_1	158	164	PF00498	0.245
LIG_FHA_1	48	54	PF00498	0.274
LIG_FHA_2	78	84	PF00498	0.289
LIG_LIR_Apic_2	68	72	PF02991	0.347
LIG_LIR_Gen_1	187	197	PF02991	0.324
LIG_LIR_Gen_1	199	208	PF02991	0.337
LIG_LIR_Gen_1	26	37	PF02991	0.278
LIG_LIR_Nem_3	187	192	PF02991	0.303
LIG_LIR_Nem_3	199	203	PF02991	0.317
LIG_LIR_Nem_3	26	32	PF02991	0.285
LIG_LIR_Nem_3	89	95	PF02991	0.282
LIG_NRBOX	204	210	PF00104	0.455
LIG_PDZ_Class_1	210	215	PF00595	0.542
LIG_Pex14_1	185	189	PF04695	0.234
LIG_SH2_STAP1	134	138	PF00017	0.276
LIG_SH2_STAT5	69	72	PF00017	0.329
LIG_Sin3_3	29	36	PF02671	0.225
LIG_SUMO_SIM_anti_2	34	40	PF11976	0.335
LIG_SUMO_SIM_par_1	194	199	PF11976	0.378
LIG_SUMO_SIM_par_1	71	77	PF11976	0.274
LIG_TRAF2_1	80	83	PF00917	0.202
LIG_TRFH_1	63	67	PF08558	0.301
LIG_UBA3_1	204	212	PF00899	0.486
LIG_WRC_WIRS_1	107	112	PF05994	0.342
LIG_WRC_WIRS_1	197	202	PF05994	0.312
MOD_CK2_1	175	181	PF00069	0.261
MOD_CK2_1	77	83	PF00069	0.285
MOD_GlcNHglycan	151	154	PF01048	0.526
MOD_GlcNHglycan	177	180	PF01048	0.505
MOD_GlcNHglycan	25	28	PF01048	0.397
MOD_GlcNHglycan	29	32	PF01048	0.402
MOD_GSK3_1	106	113	PF00069	0.291
MOD_GSK3_1	157	164	PF00069	0.292
MOD_GSK3_1	23	30	PF00069	0.285
MOD_GSK3_1	93	100	PF00069	0.321
MOD_NEK2_1	1	6	PF00069	0.571
MOD_NEK2_1	110	115	PF00069	0.293
MOD_NEK2_1	116	121	PF00069	0.277
MOD_NEK2_1	126	131	PF00069	0.287
MOD_NEK2_1	151	156	PF00069	0.299
MOD_NEK2_1	161	166	PF00069	0.235
MOD_NEK2_1	184	189	PF00069	0.296
MOD_NEK2_1	23	28	PF00069	0.284
MOD_PKA_2	126	132	PF00069	0.339
MOD_PKA_2	172	178	PF00069	0.245
MOD_PKA_2	77	83	PF00069	0.291
MOD_Plk_4	112	118	PF00069	0.305
MOD_SUMO_rev_2	139	148	PF00179	0.299
TRG_DiLeu_BaLyEn_6	15	20	PF01217	0.387
TRG_DiLeu_BaLyEn_6	204	209	PF01217	0.435
TRG_ER_diArg_1	205	207	PF00400	0.533
TRG_ER_diLys_1	211	215	PF00400	0.667
TRG_Pf-PMV_PEXEL_1	206	210	PF00026	0.338
TRG_Pf-PMV_PEXEL_1	57	62	PF00026	0.435

Homologs


Protein	Taxonomy	Sequence identity	Coverage
A0A0N1I2E2	Leptomonas seymouri	59%	100%
A0A0N1II77	Leptomonas seymouri	41%	100%
A0A0N1PA81	Leptomonas seymouri	41%	100%
A0A0S4JG68	Bodo saltans	32%	97%
A0A0S4JHA6	Bodo saltans	32%	100%
A0A0S4JHN1	Bodo saltans	24%	91%
A0A0S4JYK0	Bodo saltans	26%	100%
A0A1X0NKZ3	Trypanosomatidae	34%	97%
A0A3R7KJS3	Trypanosoma rangeli	34%	99%
A0A3S7X4D1	Leishmania donovani	41%	66%
A4HJ91	Leishmania braziliensis	73%	100%
A4HJ92	Leishmania braziliensis	44%	100%
A4I6N5	Leishmania infantum	100%	100%
A4I6N6	Leishmania infantum	40%	100%
C9ZWV3	Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972)	26%	100%
E9B1Q8	Leishmania mexicana (strain MHOM/GT/2001/U1103)	91%	100%
E9B1Q9	Leishmania mexicana (strain MHOM/GT/2001/U1103)	39%	100%
O17528	Caenorhabditis elegans	24%	100%
Q4Q6F1	Leishmania major	41%	100%
Q4Q6F2	Leishmania major	92%	100%
V5BK13	Trypanosoma cruzi	35%	97%