NF-X1 type zinc finger containing protein, putative

Quick info Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:

Gene product:

hypothetical protein, conserved

Species:

Leishmania donovani

UniProt:

A0A3S7X2B6_LEIDO

TriTrypDb:

LdBPK_290620.1 , LdCL_290011000 , LDHU3_29.0850

Length:

578

Localization

Secreted promastigote


Source	Evidence on protein	Close homologs
Cuervo et al.	no	yes: 0
Hassani et al.	no	yes: 0
Forrest at al. (metacyclic)	no	yes: 0
Forrest at al. (procyclic)	no	yes: 0
Silverman et al.	no	yes: 0
Pissara et al.	no	yes: 0

Secreted amastigote


Source	Evidence on protein	Close homologs
Pires et al.	no	yes: 0

Exosome


Source	Evidence on protein	Close homologs
Silverman et al.	no	yes: 0

Glycosome


Source	Evidence on protein	Close homologs
Jamdhade et al.	no	yes: 0

Predictions


Source	Evidence on protein	Close homologs
DeepLoc
SignalP6	no	yes: 0, no: 21
NetGPI	no	yes: 0, no: 21

Cellular components
Term	Name	Level	Count
GO:0005634	nucleus	5	22
GO:0043226	organelle	2	22
GO:0043227	membrane-bounded organelle	3	22
GO:0043229	intracellular organelle	3	22
GO:0043231	intracellular membrane-bounded organelle	4	22
GO:0110165	cellular anatomical entity	1	22
GO:0005737	cytoplasm	2	1

Expansion

Sequence features

A0A3S7X2B6

Sequence

MSA

Disorder

Secondary

Topology

Domains

SignalP

GPI

Phosphorylations

ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: A0A3S7X2B6

Function

Biological processes
Term	Name	Level	Count
GO:0006355	regulation of DNA-templated transcription	6	2
GO:0009889	regulation of biosynthetic process	4	2
GO:0010468	regulation of gene expression	5	2
GO:0010556	regulation of macromolecule biosynthetic process	5	2
GO:0019219	regulation of nucleobase-containing compound metabolic process	5	2
GO:0019222	regulation of metabolic process	3	2
GO:0031323	regulation of cellular metabolic process	4	2
GO:0031326	regulation of cellular biosynthetic process	5	2
GO:0050789	regulation of biological process	2	2
GO:0050794	regulation of cellular process	3	2
GO:0051171	regulation of nitrogen compound metabolic process	4	2
GO:0051252	regulation of RNA metabolic process	5	2
GO:0060255	regulation of macromolecule metabolic process	4	2
GO:0065007	biological regulation	1	2
GO:0080090	regulation of primary metabolic process	4	2
GO:1903506	regulation of nucleic acid-templated transcription	7	2
GO:2001141	regulation of RNA biosynthetic process	6	2

Molecular functions
Term	Name	Level	Count
GO:0003700	DNA-binding transcription factor activity	2	22
GO:0005488	binding	1	22
GO:0008270	zinc ion binding	6	22
GO:0043167	ion binding	2	22
GO:0043169	cation binding	3	22
GO:0046872	metal ion binding	4	22
GO:0046914	transition metal ion binding	5	22
GO:0140110	transcription regulator activity	1	22
GO:0003676	nucleic acid binding	3	11
GO:0097159	organic cyclic compound binding	2	11
GO:1901363	heterocyclic compound binding	2	11
GO:0003824	catalytic activity	1	1
GO:0016874	ligase activity	2	1
GO:0000976	transcription cis-regulatory region binding	5	2
GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding	6	2
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	3	2
GO:0001067	transcription regulatory region nucleic acid binding	4	2
GO:0003677	DNA binding	4	2
GO:0003690	double-stranded DNA binding	5	2
GO:0043565	sequence-specific DNA binding	5	2
GO:1990837	sequence-specific double-stranded DNA binding	6	2

Putative motif mimicry


Leishmania	From	To	Domain/Motif	Score
CLV_C14_Caspase3-7	87	91	PF00656	0.505
CLV_NRD_NRD_1	124	126	PF00675	0.412
CLV_NRD_NRD_1	219	221	PF00675	0.428
CLV_NRD_NRD_1	397	399	PF00675	0.430
CLV_NRD_NRD_1	424	426	PF00675	0.544
CLV_NRD_NRD_1	458	460	PF00675	0.390
CLV_NRD_NRD_1	532	534	PF00675	0.497
CLV_PCSK_FUR_1	217	221	PF00082	0.485
CLV_PCSK_KEX2_1	124	126	PF00082	0.393
CLV_PCSK_KEX2_1	219	221	PF00082	0.455
CLV_PCSK_KEX2_1	263	265	PF00082	0.535
CLV_PCSK_KEX2_1	397	399	PF00082	0.364
CLV_PCSK_KEX2_1	571	573	PF00082	0.500
CLV_PCSK_PC1ET2_1	263	265	PF00082	0.535
CLV_PCSK_PC1ET2_1	571	573	PF00082	0.500
CLV_PCSK_SKI1_1	103	107	PF00082	0.525
CLV_PCSK_SKI1_1	397	401	PF00082	0.537
DEG_Nend_UBRbox_4	1	3	PF02207	0.433
DOC_CKS1_1	284	289	PF01111	0.468
DOC_PP2B_LxvP_1	320	323	PF13499	0.530
DOC_PP4_FxxP_1	45	48	PF00568	0.425
DOC_PP4_FxxP_1	520	523	PF00568	0.530
DOC_PP4_FxxP_1	80	83	PF00568	0.359
DOC_USP7_MATH_1	247	251	PF00917	0.570
DOC_USP7_MATH_1	310	314	PF00917	0.428
DOC_USP7_MATH_1	350	354	PF00917	0.440
DOC_USP7_MATH_1	447	451	PF00917	0.523
DOC_WW_Pin1_4	1	6	PF00397	0.628
DOC_WW_Pin1_4	283	288	PF00397	0.447
DOC_WW_Pin1_4	333	338	PF00397	0.523
LIG_14-3-3_CanoR_1	134	138	PF00244	0.553
LIG_14-3-3_CanoR_1	304	312	PF00244	0.409
LIG_14-3-3_CanoR_1	354	359	PF00244	0.456
LIG_14-3-3_CanoR_1	457	463	PF00244	0.384
LIG_14-3-3_CanoR_1	63	71	PF00244	0.648
LIG_FHA_1	201	207	PF00498	0.605
LIG_FHA_1	315	321	PF00498	0.478
LIG_FHA_1	342	348	PF00498	0.386
LIG_FHA_1	379	385	PF00498	0.365
LIG_FHA_1	6	12	PF00498	0.459
LIG_FHA_1	66	72	PF00498	0.617
LIG_FHA_2	329	335	PF00498	0.562
LIG_FHA_2	411	417	PF00498	0.485
LIG_FHA_2	459	465	PF00498	0.410
LIG_FHA_2	563	569	PF00498	0.618
LIG_LIR_Apic_2	281	287	PF02991	0.592
LIG_LIR_Apic_2	461	465	PF02991	0.374
LIG_LIR_Apic_2	78	83	PF02991	0.378
LIG_LIR_Gen_1	450	455	PF02991	0.405
LIG_LIR_Nem_3	39	45	PF02991	0.401
LIG_LIR_Nem_3	450	454	PF02991	0.392
LIG_LIR_Nem_3	562	566	PF02991	0.529
LIG_Rb_LxCxE_1	178	196	PF01857	0.217
LIG_SH2_CRK	284	288	PF00017	0.403
LIG_SH2_STAP1	20	24	PF00017	0.382
LIG_SH2_STAP1	451	455	PF00017	0.425
LIG_SH2_STAT5	100	103	PF00017	0.372
LIG_SH2_STAT5	211	214	PF00017	0.468
LIG_SH2_STAT5	364	367	PF00017	0.389
LIG_SH2_STAT5	455	458	PF00017	0.447
LIG_SH3_2	129	134	PF14604	0.435
LIG_SH3_2	337	342	PF14604	0.553
LIG_SH3_3	126	132	PF00018	0.443
LIG_SH3_3	334	340	PF00018	0.469
LIG_SH3_3	342	348	PF00018	0.389
LIG_SH3_3	353	359	PF00018	0.290
LIG_SH3_3	383	389	PF00018	0.510
LIG_SH3_3	460	466	PF00018	0.404
LIG_SH3_3	487	493	PF00018	0.467
LIG_SUMO_SIM_anti_2	203	208	PF11976	0.304
LIG_SUMO_SIM_par_1	202	208	PF11976	0.521
LIG_TYR_ITIM	449	454	PF00017	0.478
MOD_CDK_SPxK_1	283	289	PF00069	0.460
MOD_CK1_1	562	568	PF00069	0.446
MOD_CK2_1	365	371	PF00069	0.520
MOD_CK2_1	410	416	PF00069	0.493
MOD_Cter_Amidation	531	534	PF01082	0.410
MOD_GlcNHglycan	251	254	PF01048	0.556
MOD_GlcNHglycan	68	71	PF01048	0.534
MOD_GSK3_1	1	8	PF00069	0.570
MOD_GSK3_1	160	167	PF00069	0.393
MOD_GSK3_1	310	317	PF00069	0.418
MOD_GSK3_1	350	357	PF00069	0.496
MOD_GSK3_1	380	387	PF00069	0.587
MOD_GSK3_1	478	485	PF00069	0.410
MOD_N-GLC_1	90	95	PF02516	0.392
MOD_NEK2_1	510	515	PF00069	0.432
MOD_NEK2_1	65	70	PF00069	0.643
MOD_NEK2_1	84	89	PF00069	0.424
MOD_NEK2_2	166	171	PF00069	0.417
MOD_NEK2_2	212	217	PF00069	0.561
MOD_NEK2_2	328	333	PF00069	0.445
MOD_OFUCOSY	307	314	PF10250	0.393
MOD_OFUCOSY	351	358	PF10250	0.483
MOD_OFUCOSY	396	402	PF10250	0.389
MOD_OFUCOSY	412	419	PF10250	0.397
MOD_OFUCOSY	480	486	PF10250	0.403
MOD_OFUCOSY	524	531	PF10250	0.367
MOD_PIKK_1	53	59	PF00454	0.476
MOD_PKA_2	133	139	PF00069	0.435
MOD_PKA_2	303	309	PF00069	0.392
MOD_PKA_2	405	411	PF00069	0.443
MOD_PKA_2	458	464	PF00069	0.379
MOD_Plk_1	415	421	PF00069	0.457
MOD_Plk_1	90	96	PF00069	0.390
MOD_Plk_4	133	139	PF00069	0.335
MOD_Plk_4	200	206	PF00069	0.384
MOD_Plk_4	458	464	PF00069	0.536
MOD_ProDKin_1	1	7	PF00069	0.614
MOD_ProDKin_1	283	289	PF00069	0.449
MOD_ProDKin_1	333	339	PF00069	0.394
TRG_ENDOCYTIC_2	20	23	PF00928	0.425
TRG_ENDOCYTIC_2	42	45	PF00928	0.361
TRG_ENDOCYTIC_2	451	454	PF00928	0.392
TRG_ER_diArg_1	216	219	PF00400	0.463
TRG_ER_diArg_1	397	399	PF00400	0.364
TRG_Pf-PMV_PEXEL_1	9	13	PF00026	0.377

Homologs


Protein	Taxonomy	Sequence identity	Coverage
A0A0N1HTT0	Leptomonas seymouri	36%	75%
A0A0N1I9N1	Leptomonas seymouri	72%	100%
A0A0S4INQ1	Bodo saltans	48%	96%
A0A1X0NUI9	Trypanosomatidae	38%	72%
A0A1X0NZM6	Trypanosomatidae	53%	100%
A0A3R7M581	Trypanosoma rangeli	53%	100%
A0A3R7MD54	Trypanosoma rangeli	36%	70%
A0A3S5H7A4	Leishmania donovani	35%	100%
A4HC58	Leishmania braziliensis	35%	100%
A4HH68	Leishmania braziliensis	85%	100%
A4I4B2	Leishmania infantum	100%	100%
C9ZKS5	Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972)	50%	100%
C9ZSC0	Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972)	37%	72%
E9ADR2	Leishmania major	95%	100%
E9AGY6	Leishmania infantum	35%	100%
E9AM18	Leishmania mexicana (strain MHOM/GT/2001/U1103)	95%	100%
E9AVJ1	Leishmania mexicana (strain MHOM/GT/2001/U1103)	35%	100%
Q4QBY8	Leishmania major	35%	100%
V5BFS7	Trypanosoma cruzi	38%	71%
V5BUH3	Trypanosoma cruzi	51%	100%