Deaminase_putative/GeneDB:LmjF.10.0730

Quick info Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:

Gene product:

deaminase, putative

Species:

Leishmania donovani

UniProt:

A0A3S7WR79_LEIDO

TriTrypDb:

LdBPK_100780.1 , LdCL_100014600 , LDHU3_10.1130

Length:

281

Localization

Secreted promastigote


Source	Evidence on protein	Close homologs
Cuervo et al.	no	yes: 0
Hassani et al.	no	yes: 0
Forrest at al. (metacyclic)	no	yes: 0
Forrest at al. (procyclic)	no	yes: 0
Silverman et al.	no	yes: 0
Pissara et al.	no	yes: 0

Secreted amastigote


Source	Evidence on protein	Close homologs
Pires et al.	no	yes: 0

Exosome


Source	Evidence on protein	Close homologs
Silverman et al.	no	yes: 0

Glycosome


Source	Evidence on protein	Close homologs
Jamdhade et al.	no	yes: 0

Predictions


Source	Evidence on protein	Close homologs
DeepLoc
SignalP6	no	yes: 0, no: 10
NetGPI	no	yes: 0, no: 10

Cellular components
Term	Name	Level	Count
GO:0016020	membrane	2	2
GO:0110165	cellular anatomical entity	1	2

Expansion

Sequence features

A0A3S7WR79

Sequence

MSA

Disorder

Secondary

Topology

Domains

SignalP

GPI

Phosphorylations

ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: A0A3S7WR79

Function

Biological processes
Term	Name	Level	Count
GO:0002097	tRNA wobble base modification	7	2
GO:0002100	tRNA wobble adenosine to inosine editing	8	2
GO:0006139	nucleobase-containing compound metabolic process	3	2
GO:0006382	adenosine to inosine editing	7	2
GO:0006396	RNA processing	6	2
GO:0006399	tRNA metabolic process	7	2
GO:0006400	tRNA modification	6	2
GO:0006725	cellular aromatic compound metabolic process	3	2
GO:0006807	nitrogen compound metabolic process	2	2
GO:0008033	tRNA processing	8	2
GO:0008152	metabolic process	1	2
GO:0009451	RNA modification	5	2
GO:0009987	cellular process	1	2
GO:0016070	RNA metabolic process	5	2
GO:0016553	base conversion or substitution editing	6	2
GO:0034470	ncRNA processing	7	2
GO:0034641	cellular nitrogen compound metabolic process	3	2
GO:0034660	ncRNA metabolic process	6	2
GO:0043170	macromolecule metabolic process	3	2
GO:0043412	macromolecule modification	4	2
GO:0044237	cellular metabolic process	2	2
GO:0044238	primary metabolic process	2	2
GO:0046483	heterocycle metabolic process	3	2
GO:0071704	organic substance metabolic process	2	2
GO:0090304	nucleic acid metabolic process	4	2
GO:1901360	organic cyclic compound metabolic process	3	2

Molecular functions
Term	Name	Level	Count
GO:0003824	catalytic activity	1	11
GO:0016787	hydrolase activity	2	9
GO:0004000	adenosine deaminase activity	4	2
GO:0008251	tRNA-specific adenosine deaminase activity	5	2
GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	3	2
GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	4	2
GO:0019239	deaminase activity	3	2
GO:0052717	tRNA-specific adenosine-34 deaminase activity	6	1
GO:0005488	binding	1	2
GO:0008270	zinc ion binding	6	2
GO:0043167	ion binding	2	2
GO:0043169	cation binding	3	2
GO:0046872	metal ion binding	4	2
GO:0046914	transition metal ion binding	5	2

Putative motif mimicry


Leishmania	From	To	Domain/Motif	Score
CLV_NRD_NRD_1	205	207	PF00675	0.569
CLV_NRD_NRD_1	278	280	PF00675	0.624
CLV_PCSK_FUR_1	203	207	PF00082	0.560
CLV_PCSK_KEX2_1	205	207	PF00082	0.702
CLV_PCSK_KEX2_1	276	278	PF00082	0.583
CLV_PCSK_PC1ET2_1	276	278	PF00082	0.572
CLV_PCSK_SKI1_1	11	15	PF00082	0.276
CLV_PCSK_SKI1_1	44	48	PF00082	0.361
DEG_SCF_FBW7_1	141	147	PF00400	0.549
DOC_CKS1_1	141	146	PF01111	0.549
DOC_USP7_MATH_1	112	116	PF00917	0.534
DOC_USP7_MATH_1	214	218	PF00917	0.781
DOC_USP7_MATH_1	222	226	PF00917	0.695
DOC_USP7_MATH_1	46	50	PF00917	0.469
DOC_USP7_MATH_1	60	64	PF00917	0.325
DOC_USP7_UBL2_3	276	280	PF12436	0.591
DOC_WW_Pin1_4	137	142	PF00397	0.529
DOC_WW_Pin1_4	194	199	PF00397	0.596
DOC_WW_Pin1_4	215	220	PF00397	0.736
DOC_WW_Pin1_4	225	230	PF00397	0.708
LIG_BIR_II_1	1	5	PF00653	0.565
LIG_FHA_1	141	147	PF00498	0.506
LIG_FHA_2	251	257	PF00498	0.543
LIG_LIR_Gen_1	39	47	PF02991	0.561
LIG_LIR_Gen_1	93	101	PF02991	0.431
LIG_LIR_Nem_3	151	155	PF02991	0.489
LIG_LIR_Nem_3	241	246	PF02991	0.524
LIG_LIR_Nem_3	39	45	PF02991	0.538
LIG_LIR_Nem_3	93	97	PF02991	0.431
LIG_Pex14_1	242	246	PF04695	0.551
LIG_PTB_Apo_2	179	186	PF02174	0.403
LIG_REV1ctd_RIR_1	175	182	PF16727	0.511
LIG_SH2_CRK	170	174	PF00017	0.441
LIG_SH2_CRK	42	46	PF00017	0.528
LIG_SH2_NCK_1	170	174	PF00017	0.538
LIG_SH2_PTP2	155	158	PF00017	0.458
LIG_SH2_SRC	5	8	PF00017	0.463
LIG_SH2_STAP1	42	46	PF00017	0.506
LIG_SH2_STAT5	152	155	PF00017	0.458
LIG_SH2_STAT5	246	249	PF00017	0.545
LIG_SH2_STAT5	5	8	PF00017	0.368
LIG_SH3_1	205	211	PF00018	0.559
LIG_SH3_1	267	273	PF00018	0.605
LIG_SH3_3	138	144	PF00018	0.523
LIG_SH3_3	205	211	PF00018	0.772
LIG_SH3_3	267	273	PF00018	0.605
LIG_SUMO_SIM_anti_2	256	262	PF11976	0.427
LIG_TRAF2_1	20	23	PF00917	0.538
LIG_TYR_ITIM	153	158	PF00017	0.458
LIG_TYR_ITIM	168	173	PF00017	0.458
MOD_CDK_SPK_2	215	220	PF00069	0.553
MOD_CK1_1	139	145	PF00069	0.551
MOD_CK1_1	225	231	PF00069	0.665
MOD_CK2_1	227	233	PF00069	0.732
MOD_CK2_1	250	256	PF00069	0.551
MOD_GlcNHglycan	109	113	PF01048	0.333
MOD_GlcNHglycan	146	149	PF01048	0.259
MOD_GlcNHglycan	238	241	PF01048	0.572
MOD_GSK3_1	108	115	PF00069	0.518
MOD_GSK3_1	135	142	PF00069	0.528
MOD_GSK3_1	47	54	PF00069	0.493
MOD_N-GLC_1	187	192	PF02516	0.406
MOD_N-GLC_1	37	42	PF02516	0.336
MOD_N-GLC_1	79	84	PF02516	0.258
MOD_NEK2_1	69	74	PF00069	0.561
MOD_NEK2_2	37	42	PF00069	0.526
MOD_NEK2_2	60	65	PF00069	0.409
MOD_OFUCOSY	66	73	PF10250	0.306
MOD_PIKK_1	206	212	PF00454	0.695
MOD_PKB_1	77	85	PF00069	0.472
MOD_Plk_1	37	43	PF00069	0.534
MOD_Plk_4	187	193	PF00069	0.410
MOD_Plk_4	37	43	PF00069	0.536
MOD_ProDKin_1	137	143	PF00069	0.529
MOD_ProDKin_1	194	200	PF00069	0.609
MOD_ProDKin_1	215	221	PF00069	0.738
MOD_ProDKin_1	225	231	PF00069	0.705
TRG_DiLeu_BaEn_1	256	261	PF01217	0.438
TRG_ENDOCYTIC_2	155	158	PF00928	0.455
TRG_ENDOCYTIC_2	170	173	PF00928	0.422
TRG_ENDOCYTIC_2	42	45	PF00928	0.538
TRG_ER_diArg_1	203	206	PF00400	0.556
TRG_ER_diArg_1	277	279	PF00400	0.630
TRG_NLS_MonoCore_2	275	280	PF00514	0.610
TRG_NLS_MonoExtC_3	275	280	PF00514	0.586
TRG_NLS_MonoExtN_4	273	280	PF00514	0.575
TRG_Pf-PMV_PEXEL_1	126	130	PF00026	0.264

Homologs


Protein	Taxonomy	Sequence identity	Coverage
A0A0N0P6V2	Leptomonas seymouri	48%	86%
A0A1X0NRT1	Trypanosomatidae	47%	100%
A0A422NWX1	Trypanosoma rangeli	44%	100%
A4H663	Leishmania braziliensis	77%	99%
A4HUI5	Leishmania infantum	100%	100%
C9ZVK9	Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972)	43%	100%
E9AN83	Leishmania mexicana (strain MHOM/GT/2001/U1103)	89%	100%
O94642	Schizosaccharomyces pombe (strain 972 / ATCC 24843)	24%	72%
P47058	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)	27%	100%
Q4QHE1	Leishmania major	89%	100%
Q5E9J7	Bos taurus	28%	100%
Q5RIV4	Danio rerio	26%	100%
Q6P6J0	Mus musculus	27%	100%
Q7Z6V5	Homo sapiens	26%	100%
V5DKK8	Trypanosoma cruzi	44%	100%