LeishMANIAdb
  • Home
  • Browse
  • Manual
  • FAQ
  • Download

Fibrillarin family protein

Quick info Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:
Fibrillarin family protein
Gene product:
fibrillarin
Species:
Leishmania donovani
UniProt:
A0A3S5H830_LEIDO
TriTrypDb:
LdBPK_363220.1 * , LdCL_360038800 , LDHU3_36.4430
Length:
305

Localization

Secreted promastigote
Source Evidence on protein Close homologs
Cuervo et al. no yes: 0
Hassani et al. no yes: 0
Forrest at al. (metacyclic) no yes: 0
Forrest at al. (procyclic) no yes: 0
Silverman et al. no yes: 0
Pissara et al. no yes: 0
Secreted amastigote
Source Evidence on protein Close homologs
Pires et al. no yes: 0
Exosome
Source Evidence on protein Close homologs
Silverman et al. no yes: 0
Glycosome
Source Evidence on protein Close homologs
Jamdhade et al. yes yes: 9
Predictions
Source Evidence on protein Close homologs
DeepLoc
SignalP6 no yes: 0, no: 12
NetGPI no yes: 0, no: 12
Cellular components
Term Name Level Count
GO:0005730 nucleolus 5 1
GO:0005732 sno(s)RNA-containing ribonucleoprotein complex 3 1
GO:0030684 preribosome 3 1
GO:0031428 box C/D RNP complex 4 1
GO:0032040 small-subunit processome 4 1
GO:0032991 protein-containing complex 1 1
GO:0043226 organelle 2 1
GO:0043228 non-membrane-bounded organelle 3 1
GO:0043229 intracellular organelle 3 1
GO:0043232 intracellular non-membrane-bounded organelle 4 1
GO:0110165 cellular anatomical entity 1 1
GO:1990904 ribonucleoprotein complex 2 1

Expansion

Sequence features

A0A3S5H830
Sequence
MSA
Disorder
Secondary
Topology
Domains
SignalP
GPI
Phosphorylations
ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: A0A3S5H830

Function

Biological processes
Term Name Level Count
GO:0006139 nucleobase-containing compound metabolic process 3 13
GO:0006364 rRNA processing 8 13
GO:0006396 RNA processing 6 13
GO:0006725 cellular aromatic compound metabolic process 3 13
GO:0006807 nitrogen compound metabolic process 2 13
GO:0008152 metabolic process 1 13
GO:0009987 cellular process 1 13
GO:0016070 RNA metabolic process 5 13
GO:0016072 rRNA metabolic process 7 13
GO:0032259 methylation 2 13
GO:0034470 ncRNA processing 7 13
GO:0034641 cellular nitrogen compound metabolic process 3 13
GO:0034660 ncRNA metabolic process 6 13
GO:0043170 macromolecule metabolic process 3 13
GO:0044237 cellular metabolic process 2 13
GO:0044238 primary metabolic process 2 13
GO:0046483 heterocycle metabolic process 3 13
GO:0071704 organic substance metabolic process 2 13
GO:0090304 nucleic acid metabolic process 4 13
GO:1901360 organic cyclic compound metabolic process 3 13
GO:0000154 rRNA modification 6 1
GO:0000494 box C/D RNA 3'-end processing 10 1
GO:0001510 RNA methylation 4 1
GO:0006479 protein methylation 4 1
GO:0008213 protein alkylation 5 1
GO:0009451 RNA modification 5 1
GO:0016074 sno(s)RNA metabolic process 7 1
GO:0016570 histone modification 5 1
GO:0016571 histone methylation 5 1
GO:0018364 peptidyl-glutamine methylation 5 1
GO:0019538 protein metabolic process 3 1
GO:0031123 RNA 3'-end processing 7 1
GO:0031126 sno(s)RNA 3'-end processing 9 1
GO:0031167 rRNA methylation 5 1
GO:0033967 box C/D RNA metabolic process 8 1
GO:0034963 box C/D RNA processing 9 1
GO:0036211 protein modification process 4 1
GO:0043144 sno(s)RNA processing 8 1
GO:0043412 macromolecule modification 4 1
GO:0043414 macromolecule methylation 3 1
GO:0043628 regulatory ncRNA 3'-end processing 8 1
GO:0044260 obsolete cellular macromolecule metabolic process 3 1
GO:1901564 organonitrogen compound metabolic process 3 1
GO:1990258 histone glutamine methylation 6 1
Molecular functions
Term Name Level Count
GO:0003676 nucleic acid binding 3 13
GO:0003723 RNA binding 4 13
GO:0003824 catalytic activity 1 13
GO:0005488 binding 1 13
GO:0008168 methyltransferase activity 4 13
GO:0016740 transferase activity 2 13
GO:0016741 transferase activity, transferring one-carbon groups 3 13
GO:0097159 organic cyclic compound binding 2 13
GO:1901363 heterocyclic compound binding 2 13
GO:0008170 N-methyltransferase activity 5 1
GO:0008173 RNA methyltransferase activity 4 1
GO:0008276 protein methyltransferase activity 3 1
GO:0008649 rRNA methyltransferase activity 5 1
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 5 1
GO:0036009 protein-glutamine N-methyltransferase activity 4 1
GO:0042054 histone methyltransferase activity 4 1
GO:0140096 catalytic activity, acting on a protein 2 1
GO:0140098 catalytic activity, acting on RNA 3 1
GO:0140102 catalytic activity, acting on a rRNA 4 1
GO:0140640 catalytic activity, acting on a nucleic acid 2 1
GO:1990259 histone H2AQ104 methyltransferase activity 5 1

Putative motif mimicry

Leishmania From To Domain/Motif Score
CLV_NRD_NRD_1 190 192 PF00675 0.281
CLV_PCSK_KEX2_1 102 104 PF00082 0.272
CLV_PCSK_KEX2_1 189 191 PF00082 0.281
CLV_PCSK_PC1ET2_1 102 104 PF00082 0.281
CLV_PCSK_PC1ET2_1 189 191 PF00082 0.281
CLV_PCSK_SKI1_1 298 302 PF00082 0.445
DEG_Nend_UBRbox_1 1 4 PF02207 0.443
DOC_CYCLIN_yCln2_LP_2 257 263 PF00134 0.294
DOC_MAPK_gen_1 189 197 PF00069 0.281
DOC_MAPK_gen_1 274 283 PF00069 0.377
DOC_MAPK_MEF2A_6 206 213 PF00069 0.310
DOC_MAPK_MEF2A_6 288 296 PF00069 0.294
DOC_PP2B_LxvP_1 257 260 PF13499 0.294
DOC_PP2B_PxIxI_1 93 99 PF00149 0.377
DOC_USP7_MATH_1 123 127 PF00917 0.310
DOC_USP7_MATH_1 134 138 PF00917 0.281
DOC_USP7_MATH_2 277 283 PF00917 0.294
DOC_USP7_UBL2_3 272 276 PF12436 0.294
LIG_APCC_ABBA_1 96 101 PF00400 0.281
LIG_FHA_1 82 88 PF00498 0.419
LIG_IBAR_NPY_1 122 124 PF08397 0.281
LIG_LIR_Gen_1 215 224 PF02991 0.281
LIG_LIR_Nem_3 130 136 PF02991 0.377
LIG_LIR_Nem_3 215 221 PF02991 0.281
LIG_SH2_CRK 133 137 PF00017 0.294
LIG_SH2_CRK 207 211 PF00017 0.281
LIG_SH2_CRK 297 301 PF00017 0.413
LIG_SH2_SRC 244 247 PF00017 0.294
LIG_SH2_STAP1 172 176 PF00017 0.281
LIG_SH2_STAT5 149 152 PF00017 0.281
LIG_SH2_STAT5 244 247 PF00017 0.294
LIG_SH3_3 218 224 PF00018 0.281
LIG_SH3_3 293 299 PF00018 0.425
LIG_SH3_4 276 283 PF00018 0.294
LIG_SUMO_SIM_par_1 258 266 PF11976 0.349
MOD_CK1_1 159 165 PF00069 0.302
MOD_CK1_1 86 92 PF00069 0.294
MOD_CK2_1 252 258 PF00069 0.272
MOD_GlcNHglycan 129 132 PF01048 0.403
MOD_GSK3_1 123 130 PF00069 0.375
MOD_GSK3_1 77 84 PF00069 0.389
MOD_NEK2_1 106 111 PF00069 0.328
MOD_NEK2_2 135 140 PF00069 0.294
MOD_NEK2_2 244 249 PF00069 0.281
MOD_NEK2_2 94 99 PF00069 0.281
MOD_PIKK_1 106 112 PF00454 0.310
MOD_Plk_1 253 259 PF00069 0.294
MOD_Plk_2-3 279 285 PF00069 0.281
TRG_ENDOCYTIC_2 133 136 PF00928 0.281
TRG_ENDOCYTIC_2 207 210 PF00928 0.281
TRG_ENDOCYTIC_2 297 300 PF00928 0.397
TRG_ER_diArg_1 190 192 PF00400 0.270
TRG_ER_diLys_1 301 305 PF00400 0.532
TRG_NES_CRM1_1 273 287 PF08389 0.377
TRG_NLS_MonoExtN_4 298 305 PF00514 0.529
TRG_Pf-PMV_PEXEL_1 182 186 PF00026 0.281

Homologs

Protein Taxonomy Sequence identity Coverage
A0A0N0P7A3 Leptomonas seymouri 97% 100%
A0A0N1PA75 Leptomonas seymouri 67% 100%
A0A0S4IYN2 Bodo saltans 64% 99%
A0A0S4J8H3 Bodo saltans 88% 100%
A0A1X0NKM9 Trypanosomatidae 93% 100%
A0A1X0P6R0 Trypanosomatidae 68% 99%
A0A3Q8ID71 Leishmania donovani 68% 100%
A0A422NCX2 Trypanosoma rangeli 58% 100%
A0A422NM05 Trypanosoma rangeli 85% 100%
A1RRJ7 Pyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3) 46% 100%
A3DNY7 Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1) 45% 100%
A3MV65 Pyrobaculum calidifontis (strain DSM 21063 / JCM 11548 / VA1) 45% 100%
A4FYN1 Methanococcus maripaludis (strain C5 / ATCC BAA-1333) 41% 100%
A4H9W7 Leishmania braziliensis 68% 70%
A4HPH3 Leishmania braziliensis 99% 100%
A4ID95 Leishmania infantum 100% 100%
A4WKL2 Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321 / PZ6) 46% 100%
A6NHQ2 Homo sapiens 67% 91%
A6UV22 Methanococcus aeolicus (strain ATCC BAA-1280 / DSM 17508 / OCM 812 / Nankai-3) 43% 100%
A6VJQ1 Methanococcus maripaludis (strain C7 / ATCC BAA-1331) 40% 100%
A9A6C8 Methanococcus maripaludis (strain C6 / ATCC BAA-1332) 41% 100%
B1YAJ6 Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / NBRC 100436 / V24Sta) 46% 100%
B6YXH6 Thermococcus onnurineus (strain NA1) 50% 100%
C3MPR8 Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) 43% 100%
C3MYR2 Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) 43% 100%
C3N5E4 Sulfolobus islandicus (strain M.16.27) 43% 100%
C3NDZ8 Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) 43% 100%
C3NHQ5 Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) 43% 100%
C4KH10 Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) 43% 100%
C5A403 Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) 49% 100%
C6A2L3 Thermococcus sibiricus (strain DSM 12597 / MM 739) 48% 100%
D0A0B7 Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972) 72% 100%
D0A0D0 Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972) 69% 100%
D0A3I3 Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972) 88% 100%
E9AGR2 Leishmania infantum 68% 100%
E9ARW1 Leishmania mexicana (strain MHOM/GT/2001/U1103) 68% 100%
E9AT85 Leishmania mexicana (strain MHOM/GT/2001/U1103) 100% 100%
O27283 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) 42% 100%
O57811 Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) 47% 100%
P0CW09 Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) 44% 100%
P15646 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) 62% 93%
P22087 Homo sapiens 66% 95%
P22232 Xenopus laevis 65% 94%
P22509 Rattus norvegicus 66% 93%
P35549 Leishmania major 99% 100%
P35550 Mus musculus 66% 93%
P35551 Schizosaccharomyces pombe (strain 972 / ATCC 24843) 62% 100%
P35552 Methanococcus vannielii (strain ATCC 35089 / DSM 1224 / JCM 13029 / OCM 148 / SB) 42% 100%
P35553 Methanococcus voltae 43% 100%
P58032 Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) 43% 100%
Q22053 Caenorhabditis elegans 69% 87%
Q24957 Giardia intestinalis 56% 93%
Q27200 Tetrahymena thermophila 62% 100%
Q46EB1 Methanosarcina barkeri (strain Fusaro / DSM 804) 46% 100%
Q4Q1B2 Leishmania major 100% 100%
Q4QDL1 Leishmania major 68% 100%
Q55CW0 Dictyostelium discoideum 61% 91%
Q58108 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) 42% 100%
Q5JFN1 Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) 49% 100%
Q5V3Q6 Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) 40% 100%
Q6BQ34 Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / BCRC 21394 / JCM 1990 / NBRC 0083 / IGC 2968) 61% 93%
Q6FN88 Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) 62% 94%
Q6LZM7 Methanococcus maripaludis (strain S2 / LL) 41% 100%
Q74N89 Nanoarchaeum equitans (strain Kin4-M) 42% 100%
Q756P0 Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) 62% 94%
Q80WS3 Mus musculus 67% 97%
Q8I1F4 Drosophila erecta 68% 88%
Q8SR42 Encephalitozoon cuniculi (strain GB-M1) 57% 100%
Q8TTT4 Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) 43% 100%
Q8TXU9 Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) 44% 100%
Q8U4M2 Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) 47% 100%
Q8ZTI9 Pyrobaculum aerophilum (strain ATCC 51768 / DSM 7523 / JCM 9630 / CIP 104966 / NBRC 100827 / IM2) 47% 100%
Q94AH9 Arabidopsis thaliana 69% 95%
Q971W2 Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) 46% 100%
Q9FEF8 Arabidopsis thaliana 69% 99%
Q9FHB3 Arabidopsis thaliana 55% 100%
Q9HE26 Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) 62% 94%
Q9HH35 Methanothermobacter wolfeii 43% 100%
Q9P9M0 Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) 44% 100%
Q9V2L5 Pyrococcus abyssi (strain GE5 / Orsay) 47% 100%
Q9W1V3 Drosophila melanogaster 68% 89%
Q9Y9U3 Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) 45% 100%
V5BFQ9 Trypanosoma cruzi 90% 97%
V5BS95 Trypanosoma cruzi 67% 100%

Download

Download
LeishMANIAdb - Server version: v0.0.2. - Database version: v0.0.1. - ChangeLog - © 2022-2025 Protein Bioinformatics Research Group, Institute of Enzymology, RCNS