LeishMANIAdb
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RNA binding protein, putative

Quick info Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:
RNA binding protein, putative
Gene product:
polypyrimidine tract-binding protein, putative
Species:
Leishmania donovani
UniProt:
A0A3Q8IJ43_LEIDO
TriTrypDb:
LdBPK_320900.1 * , LdCL_320014500 , LDHU3_32.1180
Length:
757

Localization

Secreted promastigote
Source Evidence on protein Close homologs
Cuervo et al. no yes: 0
Hassani et al. no yes: 0
Forrest at al. (metacyclic) no yes: 0
Forrest at al. (procyclic) no yes: 0
Silverman et al. no yes: 0
Pissara et al. no yes: 0
Secreted amastigote
Source Evidence on protein Close homologs
Pires et al. no yes: 0
Exosome
Source Evidence on protein Close homologs
Silverman et al. no yes: 0
Glycosome
Source Evidence on protein Close homologs
Jamdhade et al. no yes: 0
Predictions
Source Evidence on protein Close homologs
DeepLoc
SignalP6 no yes: 0, no: 6
NetGPI no yes: 0, no: 6
Cellular components
Term Name Level Count
GO:0005654 nucleoplasm 2 1
GO:0010494 cytoplasmic stress granule 5 1
GO:0035770 ribonucleoprotein granule 3 1
GO:0036464 cytoplasmic ribonucleoprotein granule 4 1
GO:0043226 organelle 2 1
GO:0043228 non-membrane-bounded organelle 3 1
GO:0043229 intracellular organelle 3 1
GO:0043232 intracellular non-membrane-bounded organelle 4 1
GO:0099080 supramolecular complex 2 1
GO:0110165 cellular anatomical entity 1 1

Expansion

Sequence features

A0A3Q8IJ43
Sequence
MSA
Disorder
Secondary
Topology
Domains
SignalP
GPI
Phosphorylations
ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: A0A3Q8IJ43

Function

Biological processes
Term Name Level Count
GO:0006139 nucleobase-containing compound metabolic process 3 1
GO:0006396 RNA processing 6 1
GO:0006725 cellular aromatic compound metabolic process 3 1
GO:0006807 nitrogen compound metabolic process 2 1
GO:0008152 metabolic process 1 1
GO:0009987 cellular process 1 1
GO:0016070 RNA metabolic process 5 1
GO:0034641 cellular nitrogen compound metabolic process 3 1
GO:0043170 macromolecule metabolic process 3 1
GO:0044237 cellular metabolic process 2 1
GO:0044238 primary metabolic process 2 1
GO:0046483 heterocycle metabolic process 3 1
GO:0071704 organic substance metabolic process 2 1
GO:0090304 nucleic acid metabolic process 4 1
GO:1901360 organic cyclic compound metabolic process 3 1
Molecular functions
Term Name Level Count
GO:0003676 nucleic acid binding 3 7
GO:0003723 RNA binding 4 7
GO:0005488 binding 1 7
GO:0097159 organic cyclic compound binding 2 7
GO:1901363 heterocyclic compound binding 2 7
GO:0003729 mRNA binding 5 1

Putative motif mimicry

Leishmania From To Domain/Motif Score
CLV_C14_Caspase3-7 245 249 PF00656 0.478
CLV_C14_Caspase3-7 384 388 PF00656 0.601
CLV_C14_Caspase3-7 632 636 PF00656 0.529
CLV_C14_Caspase3-7 675 679 PF00656 0.693
CLV_C14_Caspase3-7 680 684 PF00656 0.667
CLV_C14_Caspase3-7 729 733 PF00656 0.659
CLV_NRD_NRD_1 200 202 PF00675 0.649
CLV_NRD_NRD_1 374 376 PF00675 0.669
CLV_NRD_NRD_1 56 58 PF00675 0.560
CLV_NRD_NRD_1 617 619 PF00675 0.324
CLV_PCSK_FUR_1 532 536 PF00082 0.426
CLV_PCSK_KEX2_1 200 202 PF00082 0.649
CLV_PCSK_KEX2_1 373 375 PF00082 0.690
CLV_PCSK_KEX2_1 495 497 PF00082 0.403
CLV_PCSK_KEX2_1 534 536 PF00082 0.443
CLV_PCSK_KEX2_1 56 58 PF00082 0.560
CLV_PCSK_KEX2_1 617 619 PF00082 0.324
CLV_PCSK_PC1ET2_1 495 497 PF00082 0.403
CLV_PCSK_PC1ET2_1 534 536 PF00082 0.443
CLV_PCSK_SKI1_1 20 24 PF00082 0.442
CLV_PCSK_SKI1_1 215 219 PF00082 0.415
CLV_PCSK_SKI1_1 272 276 PF00082 0.431
CLV_PCSK_SKI1_1 746 750 PF00082 0.669
DEG_APCC_DBOX_1 214 222 PF00400 0.415
DEG_COP1_1 735 743 PF00400 0.667
DOC_ANK_TNKS_1 401 408 PF00023 0.730
DOC_CYCLIN_RxL_1 17 27 PF00134 0.429
DOC_MAPK_gen_1 200 206 PF00069 0.514
DOC_MAPK_gen_1 643 652 PF00069 0.529
DOC_MAPK_MEF2A_6 646 654 PF00069 0.529
DOC_PP1_RVXF_1 270 276 PF00149 0.398
DOC_PP1_RVXF_1 649 655 PF00149 0.611
DOC_PP4_FxxP_1 274 277 PF00568 0.445
DOC_PP4_FxxP_1 508 511 PF00568 0.507
DOC_USP7_MATH_1 153 157 PF00917 0.732
DOC_USP7_MATH_1 178 182 PF00917 0.656
DOC_USP7_MATH_1 196 200 PF00917 0.515
DOC_USP7_MATH_1 288 292 PF00917 0.668
DOC_USP7_MATH_1 330 334 PF00917 0.619
DOC_USP7_MATH_1 661 665 PF00917 0.699
DOC_USP7_MATH_1 700 704 PF00917 0.724
DOC_USP7_MATH_1 710 714 PF00917 0.637
DOC_USP7_MATH_1 752 756 PF00917 0.574
DOC_USP7_UBL2_3 602 606 PF12436 0.529
DOC_USP7_UBL2_3 749 753 PF12436 0.648
DOC_WW_Pin1_4 165 170 PF00397 0.688
DOC_WW_Pin1_4 434 439 PF00397 0.651
LIG_14-3-3_CanoR_1 183 192 PF00244 0.507
LIG_14-3-3_CanoR_1 56 60 PF00244 0.542
LIG_14-3-3_CanoR_1 651 655 PF00244 0.500
LIG_Actin_WH2_2 589 604 PF00022 0.529
LIG_AP2alpha_2 369 371 PF02296 0.633
LIG_APCC_ABBA_1 271 276 PF00400 0.471
LIG_APCC_ABBAyCdc20_2 578 584 PF00400 0.482
LIG_BIR_II_1 1 5 PF00653 0.447
LIG_BIR_III_4 334 338 PF00653 0.637
LIG_deltaCOP1_diTrp_1 480 488 PF00928 0.430
LIG_eIF4E_1 479 485 PF01652 0.341
LIG_FHA_1 1 7 PF00498 0.420
LIG_FHA_1 212 218 PF00498 0.418
LIG_FHA_1 239 245 PF00498 0.448
LIG_FHA_1 464 470 PF00498 0.424
LIG_FHA_1 500 506 PF00498 0.439
LIG_FHA_1 591 597 PF00498 0.478
LIG_FHA_2 44 50 PF00498 0.468
LIG_FHA_2 542 548 PF00498 0.564
LIG_FHA_2 630 636 PF00498 0.529
LIG_FHA_2 686 692 PF00498 0.665
LIG_IBAR_NPY_1 321 323 PF08397 0.707
LIG_LIR_Apic_2 302 307 PF02991 0.738
LIG_LIR_Gen_1 276 287 PF02991 0.616
LIG_LIR_Gen_1 480 488 PF02991 0.354
LIG_LIR_Gen_1 647 657 PF02991 0.573
LIG_LIR_Nem_3 276 282 PF02991 0.583
LIG_LIR_Nem_3 434 439 PF02991 0.625
LIG_LIR_Nem_3 480 485 PF02991 0.351
LIG_LIR_Nem_3 486 491 PF02991 0.363
LIG_LIR_Nem_3 647 652 PF02991 0.473
LIG_LIR_Nem_3 653 657 PF02991 0.459
LIG_LYPXL_yS_3 457 460 PF13949 0.526
LIG_NRBOX 480 486 PF00104 0.352
LIG_NRP_CendR_1 756 757 PF00754 0.692
LIG_Pex14_2 275 279 PF04695 0.483
LIG_PTB_Apo_2 264 271 PF02174 0.491
LIG_PTB_Phospho_1 264 270 PF10480 0.500
LIG_REV1ctd_RIR_1 613 619 PF16727 0.495
LIG_SH2_CRK 150 154 PF00017 0.641
LIG_SH2_CRK 304 308 PF00017 0.698
LIG_SH2_NCK_1 150 154 PF00017 0.641
LIG_SH2_NCK_1 323 327 PF00017 0.565
LIG_SH2_PTP2 270 273 PF00017 0.382
LIG_SH2_STAP1 479 483 PF00017 0.343
LIG_SH2_STAT3 157 160 PF00017 0.708
LIG_SH2_STAT3 306 309 PF00017 0.619
LIG_SH2_STAT5 176 179 PF00017 0.623
LIG_SH2_STAT5 270 273 PF00017 0.382
LIG_SH2_STAT5 520 523 PF00017 0.412
LIG_SH2_STAT5 588 591 PF00017 0.529
LIG_SH3_1 281 287 PF00018 0.570
LIG_SH3_1 568 574 PF00018 0.556
LIG_SH3_2 195 200 PF14604 0.600
LIG_SH3_3 152 158 PF00018 0.696
LIG_SH3_3 190 196 PF00018 0.594
LIG_SH3_3 232 238 PF00018 0.496
LIG_SH3_3 281 287 PF00018 0.616
LIG_SH3_3 324 330 PF00018 0.585
LIG_SH3_3 357 363 PF00018 0.608
LIG_SH3_3 435 441 PF00018 0.643
LIG_SH3_3 568 574 PF00018 0.556
LIG_SH3_3 655 661 PF00018 0.498
LIG_SH3_3 69 75 PF00018 0.572
LIG_SH3_3 696 702 PF00018 0.701
LIG_SH3_3 713 719 PF00018 0.652
LIG_SH3_3 93 99 PF00018 0.657
LIG_SUMO_SIM_par_1 2 7 PF11976 0.479
LIG_SUMO_SIM_par_1 227 232 PF11976 0.422
LIG_SUMO_SIM_par_1 465 470 PF11976 0.461
LIG_TRAF2_1 46 49 PF00917 0.484
LIG_TRAF2_1 709 712 PF00917 0.743
LIG_TRAF2_1 720 723 PF00917 0.649
LIG_TRAF2_1 727 730 PF00917 0.574
LIG_UBA3_1 637 643 PF00899 0.460
MOD_CK1_1 172 178 PF00069 0.816
MOD_CK1_1 181 187 PF00069 0.543
MOD_CK1_1 35 41 PF00069 0.564
MOD_CK1_1 352 358 PF00069 0.665
MOD_CK1_1 398 404 PF00069 0.661
MOD_CK2_1 43 49 PF00069 0.472
MOD_CK2_1 434 440 PF00069 0.635
MOD_CK2_1 541 547 PF00069 0.555
MOD_CK2_1 594 600 PF00069 0.473
MOD_CK2_1 685 691 PF00069 0.669
MOD_Cter_Amidation 371 374 PF01082 0.590
MOD_GlcNHglycan 114 117 PF01048 0.693
MOD_GlcNHglycan 186 189 PF01048 0.612
MOD_GlcNHglycan 301 304 PF01048 0.718
MOD_GlcNHglycan 355 358 PF01048 0.726
MOD_GlcNHglycan 383 386 PF01048 0.647
MOD_GlcNHglycan 425 428 PF01048 0.682
MOD_GlcNHglycan 440 444 PF01048 0.758
MOD_GlcNHglycan 536 539 PF01048 0.531
MOD_GlcNHglycan 712 715 PF01048 0.745
MOD_GlcNHglycan 737 740 PF01048 0.634
MOD_GSK3_1 165 172 PF00069 0.734
MOD_GSK3_1 177 184 PF00069 0.584
MOD_GSK3_1 293 300 PF00069 0.669
MOD_GSK3_1 349 356 PF00069 0.653
MOD_GSK3_1 459 466 PF00069 0.523
MOD_GSK3_1 541 548 PF00069 0.602
MOD_GSK3_1 549 556 PF00069 0.491
MOD_GSK3_1 590 597 PF00069 0.490
MOD_N-GLC_1 178 183 PF02516 0.635
MOD_N-GLC_1 472 477 PF02516 0.465
MOD_N-GLC_1 590 595 PF02516 0.275
MOD_N-GLC_2 267 269 PF02516 0.494
MOD_N-GLC_2 463 465 PF02516 0.462
MOD_NEK2_1 24 29 PF00069 0.518
MOD_NEK2_1 526 531 PF00069 0.377
MOD_NEK2_1 560 565 PF00069 0.529
MOD_NEK2_1 587 592 PF00069 0.496
MOD_NEK2_1 650 655 PF00069 0.442
MOD_NEK2_2 40 45 PF00069 0.444
MOD_OFUCOSY 465 471 PF10250 0.417
MOD_PIKK_1 35 41 PF00454 0.489
MOD_PIKK_1 358 364 PF00454 0.710
MOD_PIKK_1 685 691 PF00454 0.674
MOD_PIKK_1 700 706 PF00454 0.578
MOD_PKA_1 534 540 PF00069 0.524
MOD_PKA_2 398 404 PF00069 0.658
MOD_PKA_2 423 429 PF00069 0.668
MOD_PKA_2 526 532 PF00069 0.396
MOD_PKA_2 534 540 PF00069 0.485
MOD_PKA_2 541 547 PF00069 0.555
MOD_PKA_2 55 61 PF00069 0.535
MOD_PKA_2 650 656 PF00069 0.510
MOD_PKA_2 661 667 PF00069 0.521
MOD_Plk_1 472 478 PF00069 0.411
MOD_Plk_2-3 541 547 PF00069 0.555
MOD_Plk_2-3 594 600 PF00069 0.460
MOD_Plk_4 172 178 PF00069 0.653
MOD_Plk_4 463 469 PF00069 0.440
MOD_Plk_4 526 532 PF00069 0.485
MOD_ProDKin_1 165 171 PF00069 0.690
MOD_ProDKin_1 434 440 PF00069 0.650
MOD_SUMO_rev_2 541 551 PF00179 0.599
MOD_SUMO_rev_2 594 604 PF00179 0.529
TRG_DiLeu_BaEn_1 49 54 PF01217 0.444
TRG_ENDOCYTIC_2 126 129 PF00928 0.685
TRG_ENDOCYTIC_2 270 273 PF00928 0.382
TRG_ENDOCYTIC_2 457 460 PF00928 0.544
TRG_ER_diArg_1 200 203 PF00400 0.654
TRG_ER_diArg_1 373 375 PF00400 0.585
TRG_ER_diArg_1 577 580 PF00400 0.600
TRG_ER_diArg_1 616 618 PF00400 0.524
TRG_Pf-PMV_PEXEL_1 203 207 PF00026 0.559

Homologs

Protein Taxonomy Sequence identity Coverage
A0A0N1I1I1 Leptomonas seymouri 42% 100%
A4HK66 Leishmania braziliensis 73% 99%
A4I7Q1 Leishmania infantum 99% 100%
E9B2K9 Leishmania mexicana (strain MHOM/GT/2001/U1103) 90% 100%
Q4Q5J7 Leishmania major 92% 100%

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LeishMANIAdb - Server version: v0.0.2. - Database version: v0.0.1. - ChangeLog - © 2022-2025 Protein Bioinformatics Research Group, Institute of Enzymology, RCNS