Tubulin_tyrosine_ligase_putative/GeneDB:LmjF.35.4 930

Quick info Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:

Gene product:

tubulin tyrosine ligase, putative

Species:

Leishmania donovani

UniProt:

A0A3Q8III2_LEIDO

TriTrypDb:

LdBPK_354980.1 , LdCL_350054800 , LDHU3_35.6520

Length:

725

Localization

Secreted promastigote


Source	Evidence on protein	Close homologs
Cuervo et al.	no	yes: 0
Hassani et al.	no	yes: 0
Forrest at al. (metacyclic)	no	yes: 0
Forrest at al. (procyclic)	no	yes: 0
Silverman et al.	no	yes: 0
Pissara et al.	no	yes: 0

Secreted amastigote


Source	Evidence on protein	Close homologs
Pires et al.	no	yes: 0

Exosome


Source	Evidence on protein	Close homologs
Silverman et al.	no	yes: 0

Glycosome


Source	Evidence on protein	Close homologs
Jamdhade et al.	yes	yes: 9

Predictions


Source	Evidence on protein	Close homologs
DeepLoc
SignalP6	no	yes: 0, no: 11
NetGPI	no	yes: 0, no: 11

Cellular components
Term	Name	Level	Count
GO:0005929	cilium	4	1
GO:0042995	cell projection	2	1
GO:0043226	organelle	2	1
GO:0043227	membrane-bounded organelle	3	1
GO:0110165	cellular anatomical entity	1	1
GO:0120025	plasma membrane bounded cell projection	3	1

Expansion

Sequence features

A0A3Q8III2

Sequence

MSA

Disorder

Secondary

Topology

Domains

SignalP

GPI

Phosphorylations

ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: A0A3Q8III2

Function

Biological processes
Term	Name	Level	Count
GO:0006807	nitrogen compound metabolic process	2	12
GO:0008152	metabolic process	1	12
GO:0019538	protein metabolic process	3	12
GO:0036211	protein modification process	4	12
GO:0043170	macromolecule metabolic process	3	12
GO:0043412	macromolecule modification	4	12
GO:0044238	primary metabolic process	2	12
GO:0071704	organic substance metabolic process	2	12
GO:1901564	organonitrogen compound metabolic process	3	12
GO:0000226	microtubule cytoskeleton organization	3	1
GO:0006996	organelle organization	4	1
GO:0007010	cytoskeleton organization	5	1
GO:0007017	microtubule-based process	2	1
GO:0009987	cellular process	1	1
GO:0016043	cellular component organization	3	1
GO:0018095	protein polyglutamylation	7	1
GO:0018193	peptidyl-amino acid modification	5	1
GO:0018200	peptidyl-glutamic acid modification	6	1
GO:0071840	cellular component organization or biogenesis	2	1

Molecular functions
Term	Name	Level	Count
GO:0003824	catalytic activity	1	12
GO:0004835	tubulin-tyrosine ligase activity	3	5
GO:0016874	ligase activity	2	12
GO:0016879	ligase activity, forming carbon-nitrogen bonds	3	5
GO:0016881	acid-amino acid ligase activity	4	5
GO:0140096	catalytic activity, acting on a protein	2	5
GO:0005488	binding	1	1
GO:0005515	protein binding	2	1
GO:0008092	cytoskeletal protein binding	3	1
GO:0015631	tubulin binding	4	1
GO:0070739	protein-glutamic acid ligase activity	3	1
GO:0070740	tubulin-glutamic acid ligase activity	4	1

Putative motif mimicry


Leishmania	From	To	Domain/Motif	Score
CLV_C14_Caspase3-7	202	206	PF00656	0.614
CLV_NRD_NRD_1	175	177	PF00675	0.483
CLV_NRD_NRD_1	308	310	PF00675	0.223
CLV_NRD_NRD_1	318	320	PF00675	0.113
CLV_NRD_NRD_1	346	348	PF00675	0.322
CLV_NRD_NRD_1	408	410	PF00675	0.223
CLV_NRD_NRD_1	599	601	PF00675	0.321
CLV_NRD_NRD_1	701	703	PF00675	0.391
CLV_NRD_NRD_1	82	84	PF00675	0.522
CLV_PCSK_KEX2_1	175	177	PF00082	0.483
CLV_PCSK_KEX2_1	282	284	PF00082	0.339
CLV_PCSK_KEX2_1	318	320	PF00082	0.295
CLV_PCSK_KEX2_1	346	348	PF00082	0.297
CLV_PCSK_KEX2_1	492	494	PF00082	0.312
CLV_PCSK_KEX2_1	599	601	PF00082	0.297
CLV_PCSK_KEX2_1	701	703	PF00082	0.391
CLV_PCSK_KEX2_1	81	83	PF00082	0.550
CLV_PCSK_PC1ET2_1	175	177	PF00082	0.496
CLV_PCSK_PC1ET2_1	282	284	PF00082	0.339
CLV_PCSK_PC1ET2_1	492	494	PF00082	0.324
CLV_PCSK_PC7_1	171	177	PF00082	0.538
CLV_PCSK_SKI1_1	176	180	PF00082	0.485
CLV_PCSK_SKI1_1	282	286	PF00082	0.351
CLV_PCSK_SKI1_1	334	338	PF00082	0.277
CLV_PCSK_SKI1_1	519	523	PF00082	0.212
CLV_PCSK_SKI1_1	579	583	PF00082	0.223
CLV_PCSK_SKI1_1	642	646	PF00082	0.419
CLV_PCSK_SKI1_1	97	101	PF00082	0.500
DEG_APCC_DBOX_1	241	249	PF00400	0.333
DEG_SCF_FBW7_1	50	57	PF00400	0.508
DOC_CKS1_1	353	358	PF01111	0.512
DOC_CYCLIN_RxL_1	171	180	PF00134	0.471
DOC_CYCLIN_RxL_1	638	646	PF00134	0.424
DOC_CYCLIN_yClb5_NLxxxL_5	553	562	PF00134	0.429
DOC_MAPK_FxFP_2	193	196	PF00069	0.413
DOC_MAPK_gen_1	409	415	PF00069	0.437
DOC_MAPK_gen_1	559	567	PF00069	0.512
DOC_MAPK_MEF2A_6	559	567	PF00069	0.512
DOC_MAPK_MEF2A_6	86	95	PF00069	0.521
DOC_PP2B_LxvP_1	49	52	PF13499	0.518
DOC_PP2B_PxIxI_1	358	364	PF00149	0.437
DOC_PP4_FxxP_1	107	110	PF00568	0.591
DOC_PP4_FxxP_1	15	18	PF00568	0.630
DOC_PP4_FxxP_1	193	196	PF00568	0.370
DOC_PP4_FxxP_1	336	339	PF00568	0.423
DOC_PP4_FxxP_1	648	651	PF00568	0.383
DOC_USP7_MATH_1	118	122	PF00917	0.663
DOC_USP7_MATH_1	128	132	PF00917	0.577
DOC_USP7_MATH_1	366	370	PF00917	0.419
DOC_USP7_MATH_1	52	56	PF00917	0.611
DOC_USP7_MATH_1	537	541	PF00917	0.512
DOC_USP7_MATH_1	572	576	PF00917	0.477
DOC_USP7_MATH_1	580	584	PF00917	0.386
DOC_USP7_MATH_1	633	637	PF00917	0.542
DOC_WW_Pin1_4	352	357	PF00397	0.483
DOC_WW_Pin1_4	50	55	PF00397	0.626
LIG_14-3-3_CanoR_1	130	136	PF00244	0.597
LIG_14-3-3_CanoR_1	171	179	PF00244	0.537
LIG_14-3-3_CanoR_1	225	231	PF00244	0.566
LIG_14-3-3_CanoR_1	268	276	PF00244	0.484
LIG_14-3-3_CanoR_1	283	287	PF00244	0.295
LIG_14-3-3_CanoR_1	493	503	PF00244	0.477
LIG_14-3-3_CanoR_1	584	593	PF00244	0.472
LIG_14-3-3_CanoR_1	642	651	PF00244	0.508
LIG_14-3-3_CanoR_1	81	86	PF00244	0.547
LIG_Actin_RPEL_3	577	596	PF02755	0.455
LIG_Actin_WH2_2	252	270	PF00022	0.392
LIG_APCC_ABBA_1	427	432	PF00400	0.423
LIG_APCC_ABBAyCdc20_2	426	432	PF00400	0.412
LIG_APCC_Cbox_2	690	696	PF00515	0.317
LIG_BIR_II_1	1	5	PF00653	0.667
LIG_BRCT_BRCA1_1	11	15	PF00533	0.573
LIG_BRCT_BRCA1_1	191	195	PF00533	0.298
LIG_Clathr_ClatBox_1	547	551	PF01394	0.512
LIG_deltaCOP1_diTrp_1	483	491	PF00928	0.455
LIG_eIF4E_1	399	405	PF01652	0.479
LIG_FHA_1	195	201	PF00498	0.531
LIG_FHA_1	302	308	PF00498	0.412
LIG_FHA_1	44	50	PF00498	0.516
LIG_FHA_1	462	468	PF00498	0.430
LIG_FHA_1	55	61	PF00498	0.637
LIG_FHA_1	607	613	PF00498	0.643
LIG_FHA_1	74	80	PF00498	0.294
LIG_FHA_1	82	88	PF00498	0.374
LIG_FHA_2	101	107	PF00498	0.541
LIG_FHA_2	418	424	PF00498	0.434
LIG_LIR_Apic_2	106	110	PF02991	0.579
LIG_LIR_Apic_2	12	18	PF02991	0.624
LIG_LIR_Apic_2	192	196	PF02991	0.403
LIG_LIR_Apic_2	208	212	PF02991	0.450
LIG_LIR_Apic_2	335	339	PF02991	0.414
LIG_LIR_Apic_2	646	651	PF02991	0.389
LIG_LIR_Gen_1	229	240	PF02991	0.411
LIG_LIR_Gen_1	275	284	PF02991	0.333
LIG_LIR_Gen_1	326	337	PF02991	0.405
LIG_LIR_Gen_1	520	529	PF02991	0.477
LIG_LIR_Gen_1	654	665	PF02991	0.391
LIG_LIR_Nem_3	229	235	PF02991	0.421
LIG_LIR_Nem_3	275	279	PF02991	0.304
LIG_LIR_Nem_3	326	332	PF02991	0.414
LIG_LIR_Nem_3	420	425	PF02991	0.412
LIG_LIR_Nem_3	520	524	PF02991	0.477
LIG_LIR_Nem_3	690	695	PF02991	0.312
LIG_LIR_Nem_3	88	93	PF02991	0.535
LIG_LYPXL_yS_3	90	93	PF13949	0.536
LIG_MLH1_MIPbox_1	191	195	PF16413	0.317
LIG_MYND_1	58	62	PF01753	0.585
LIG_Pex14_2	276	280	PF04695	0.297
LIG_Pex14_2	301	305	PF04695	0.412
LIG_PTB_Apo_2	106	113	PF02174	0.493
LIG_PTB_Apo_2	628	635	PF02174	0.419
LIG_PTB_Phospho_1	106	112	PF10480	0.488
LIG_RPA_C_Fungi	117	129	PF08784	0.700
LIG_SH2_CRK	295	299	PF00017	0.267
LIG_SH2_CRK	416	420	PF00017	0.264
LIG_SH2_PTP2	232	235	PF00017	0.340
LIG_SH2_SRC	112	115	PF00017	0.577
LIG_SH2_STAP1	669	673	PF00017	0.439
LIG_SH2_STAT5	112	115	PF00017	0.496
LIG_SH2_STAT5	199	202	PF00017	0.502
LIG_SH2_STAT5	232	235	PF00017	0.340
LIG_SH2_STAT5	269	272	PF00017	0.333
LIG_SH2_STAT5	287	290	PF00017	0.359
LIG_SH2_STAT5	362	365	PF00017	0.329
LIG_SH2_STAT5	399	402	PF00017	0.272
LIG_SH2_STAT5	416	419	PF00017	0.326
LIG_SH2_STAT5	428	431	PF00017	0.311
LIG_SH2_STAT5	613	616	PF00017	0.593
LIG_SH2_STAT5	657	660	PF00017	0.430
LIG_SH2_STAT5	692	695	PF00017	0.310
LIG_SH2_STAT5	705	708	PF00017	0.300
LIG_SH2_STAT5	98	101	PF00017	0.484
LIG_SH3_1	379	385	PF00018	0.287
LIG_SH3_2	353	358	PF14604	0.392
LIG_SH3_3	155	161	PF00018	0.704
LIG_SH3_3	178	184	PF00018	0.378
LIG_SH3_3	350	356	PF00018	0.392
LIG_SH3_3	379	385	PF00018	0.267
LIG_SH3_3	637	643	PF00018	0.415
LIG_SH3_3	96	102	PF00018	0.447
LIG_TRAF2_2	445	450	PF00917	0.392
LIG_TRFH_1	362	366	PF08558	0.364
LIG_TYR_ITIM	230	235	PF00017	0.346
LIG_UBA3_1	360	365	PF00899	0.287
LIG_WRC_WIRS_1	419	424	PF05994	0.287
LIG_WRC_WIRS_1	518	523	PF05994	0.342
MOD_CDK_SPxK_1	352	358	PF00069	0.392
MOD_CK1_1	121	127	PF00069	0.658
MOD_CK1_1	131	137	PF00069	0.548
MOD_CK1_1	139	145	PF00069	0.427
MOD_CK1_1	149	155	PF00069	0.594
MOD_CK1_1	189	195	PF00069	0.321
MOD_CK1_1	231	237	PF00069	0.420
MOD_CK1_1	41	47	PF00069	0.690
MOD_CK1_1	468	474	PF00069	0.381
MOD_CK1_1	56	62	PF00069	0.546
MOD_CK1_1	570	576	PF00069	0.252
MOD_CK1_1	656	662	PF00069	0.362
MOD_CK2_1	231	237	PF00069	0.501
MOD_CK2_1	656	662	PF00069	0.360
MOD_Cter_Amidation	307	310	PF01082	0.252
MOD_Cter_Amidation	407	410	PF01082	0.267
MOD_GlcNHglycan	1	4	PF01048	0.665
MOD_GlcNHglycan	11	14	PF01048	0.676
MOD_GlcNHglycan	130	133	PF01048	0.725
MOD_GlcNHglycan	143	146	PF01048	0.578
MOD_GlcNHglycan	188	191	PF01048	0.383
MOD_GlcNHglycan	255	258	PF01048	0.465
MOD_GlcNHglycan	442	445	PF01048	0.389
MOD_GlcNHglycan	538	542	PF01048	0.351
MOD_GlcNHglycan	635	638	PF01048	0.501
MOD_GlcNHglycan	708	711	PF01048	0.353
MOD_GSK3_1	114	121	PF00069	0.635
MOD_GSK3_1	136	143	PF00069	0.557
MOD_GSK3_1	146	153	PF00069	0.551
MOD_GSK3_1	185	192	PF00069	0.409
MOD_GSK3_1	457	464	PF00069	0.273
MOD_GSK3_1	50	57	PF00069	0.617
MOD_GSK3_1	580	587	PF00069	0.441
MOD_GSK3_1	656	663	PF00069	0.428
MOD_GSK3_1	73	80	PF00069	0.434
MOD_GSK3_1	81	88	PF00069	0.406
MOD_N-GLC_1	226	231	PF02516	0.467
MOD_N-GLC_1	457	462	PF02516	0.258
MOD_N-GLC_1	606	611	PF02516	0.555
MOD_NEK2_1	1	6	PF00069	0.666
MOD_NEK2_1	170	175	PF00069	0.634
MOD_NEK2_1	228	233	PF00069	0.534
MOD_NEK2_1	660	665	PF00069	0.491
MOD_NEK2_1	706	711	PF00069	0.332
MOD_PIKK_1	599	605	PF00454	0.525
MOD_PK_1	16	22	PF00069	0.564
MOD_PKA_1	282	288	PF00069	0.425
MOD_PKA_1	440	446	PF00069	0.288
MOD_PKA_1	599	605	PF00069	0.504
MOD_PKA_1	81	87	PF00069	0.548
MOD_PKA_2	121	127	PF00069	0.642
MOD_PKA_2	139	145	PF00069	0.450
MOD_PKA_2	170	176	PF00069	0.637
MOD_PKA_2	267	273	PF00069	0.475
MOD_PKA_2	282	288	PF00069	0.292
MOD_PKA_2	599	605	PF00069	0.498
MOD_PKA_2	700	706	PF00069	0.403
MOD_PKA_2	81	87	PF00069	0.544
MOD_PKB_1	120	128	PF00069	0.702
MOD_Plk_1	226	232	PF00069	0.469
MOD_Plk_1	457	463	PF00069	0.270
MOD_Plk_1	623	629	PF00069	0.506
MOD_Plk_1	653	659	PF00069	0.485
MOD_Plk_2-3	475	481	PF00069	0.287
MOD_Plk_4	189	195	PF00069	0.299
MOD_Plk_4	228	234	PF00069	0.439
MOD_Plk_4	282	288	PF00069	0.486
MOD_Plk_4	332	338	PF00069	0.267
MOD_Plk_4	517	523	PF00069	0.387
MOD_Plk_4	56	62	PF00069	0.465
MOD_Plk_4	588	594	PF00069	0.287
MOD_Plk_4	653	659	PF00069	0.350
MOD_Plk_4	660	666	PF00069	0.337
MOD_ProDKin_1	352	358	PF00069	0.351
MOD_ProDKin_1	50	56	PF00069	0.627
TRG_DiLeu_BaEn_4	165	171	PF01217	0.619
TRG_DiLeu_BaLyEn_6	356	361	PF01217	0.287
TRG_DiLeu_BaLyEn_6	400	405	PF01217	0.366
TRG_DiLeu_BaLyEn_6	558	563	PF01217	0.287
TRG_DiLeu_BaLyEn_6	640	645	PF01217	0.413
TRG_ENDOCYTIC_2	232	235	PF00928	0.480
TRG_ENDOCYTIC_2	295	298	PF00928	0.296
TRG_ENDOCYTIC_2	416	419	PF00928	0.252
TRG_ENDOCYTIC_2	657	660	PF00928	0.453
TRG_ENDOCYTIC_2	90	93	PF00928	0.536
TRG_ER_diArg_1	317	319	PF00400	0.392
TRG_ER_diArg_1	345	347	PF00400	0.398
TRG_ER_diArg_1	598	600	PF00400	0.405
TRG_ER_diArg_1	700	702	PF00400	0.430
TRG_ER_diArg_1	81	83	PF00400	0.577

Homologs


Protein	Taxonomy	Sequence identity	Coverage
A0A0N1IAP5	Leptomonas seymouri	76%	98%
A0A0S4J7C9	Bodo saltans	51%	100%
A0A1X0NXX8	Trypanosomatidae	29%	100%
A0A1X0P6A0	Trypanosomatidae	55%	100%
A0A3S7X261	Leishmania donovani	27%	100%
A0A422NPL9	Trypanosoma rangeli	32%	100%
A0A422P136	Trypanosoma rangeli	55%	100%
A4HNF6	Leishmania braziliensis	86%	99%
A4I479	Leishmania infantum	27%	100%
A4IC28	Leishmania infantum	100%	100%
A4Q9E8	Mus musculus	32%	88%
C9ZI96	Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972)	28%	100%
C9ZYH1	Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972)	52%	100%
E9ADM8	Leishmania major	27%	100%
E9AFW7	Leishmania major	95%	100%
E9AID0	Leishmania braziliensis	28%	97%
E9AM52	Leishmania mexicana (strain MHOM/GT/2001/U1103)	27%	100%
E9B720	Leishmania mexicana (strain MHOM/GT/2001/U1103)	96%	100%
Q4QCW7	Leishmania major	27%	100%
V5BVF5	Trypanosoma cruzi	30%	100%