RNA-binding protein, putative

Quick info Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:

Gene product:

RNA-binding protein, putative

Species:

Leishmania donovani

UniProt:

A0A3Q8II02_LEIDO

TriTrypDb:

LdBPK_302200.1 , LdCL_300027500 , LDHU3_30.2990

Length:

502

Localization

Secreted promastigote


Source	Evidence on protein	Close homologs
Cuervo et al.	no	yes: 0
Hassani et al.	no	yes: 0
Forrest at al. (metacyclic)	no	yes: 0
Forrest at al. (procyclic)	no	yes: 0
Silverman et al.	no	yes: 0
Pissara et al.	no	yes: 0

Secreted amastigote


Source	Evidence on protein	Close homologs
Pires et al.	no	yes: 0

Exosome


Source	Evidence on protein	Close homologs
Silverman et al.	no	yes: 0

Glycosome


Source	Evidence on protein	Close homologs
Jamdhade et al.	no	yes: 0

Predictions


Source	Evidence on protein	Close homologs
DeepLoc
SignalP6	no	yes: 0, no: 7
NetGPI	no	yes: 0, no: 7

Show entries

Cellular components
Term	Name	Level	Count
GO:0005634	nucleus	5	1
GO:0005737	cytoplasm	2	1
GO:0032991	protein-containing complex	1	1
GO:0043226	organelle	2	1
GO:0043227	membrane-bounded organelle	3	1
GO:0043229	intracellular organelle	3	1
GO:0043231	intracellular membrane-bounded organelle	4	1
GO:0110165	cellular anatomical entity	1	1
GO:1990904	ribonucleoprotein complex	2	1

Previous1Next

Expansion

Sequence features

A0A3Q8II02

Sequence

MSA

Disorder

Secondary

Topology

Domains

SignalP

GPI

Phosphorylations

ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: A0A3Q8II02

Function

Could not find GO biological_process term for this entry.

Show entries

Molecular functions
Term	Name	Level	Count
GO:0003676	nucleic acid binding	3	8
GO:0003723	RNA binding	4	8
GO:0003729	mRNA binding	5	1
GO:0005488	binding	1	8
GO:0097159	organic cyclic compound binding	2	8
GO:1901363	heterocyclic compound binding	2	8

Previous1Next

Putative motif mimicry

Show entries


Leishmania	From	To	Domain/Motif	Score
CLV_C14_Caspase3-7	439	443	PF00656	0.482
CLV_NRD_NRD_1	185	187	PF00675	0.527
CLV_NRD_NRD_1	65	67	PF00675	0.252
CLV_PCSK_FUR_1	182	186	PF00082	0.539
CLV_PCSK_KEX2_1	182	184	PF00082	0.541
CLV_PCSK_KEX2_1	185	187	PF00082	0.544
CLV_PCSK_SKI1_1	113	117	PF00082	0.220
CLV_PCSK_SKI1_1	149	153	PF00082	0.285
CLV_PCSK_SKI1_1	33	37	PF00082	0.285
CLV_PCSK_SKI1_1	414	418	PF00082	0.586

Previous1 2 3 4 5…17Next

Homologs

Show entries


Protein	Taxonomy	Sequence identity	Coverage
A0A0N1I1Q0	Leptomonas seymouri	63%	100%
A4H9C3	Leishmania braziliensis	26%	100%
A4HIF1	Leishmania braziliensis	70%	98%
A4I5P8	Leishmania infantum	99%	100%
C9ZR15	Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972)	42%	100%
E9B0Z2	Leishmania mexicana (strain MHOM/GT/2001/U1103)	91%	100%
P42731	Arabidopsis thaliana	22%	80%
Q4Q774	Leishmania major	88%	99%
Q9FXA2	Arabidopsis thaliana	26%	75%

Previous1Next