LeishMANIAdb
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Protein YIPF

Quick info Annotations Function or PPIs Localization Expansion Sequence features Structure Function Putative motif mimicry Homologs Download

Quick info

Protein:
Protein YIPF
Gene product:
Yip1 domain containing protein, putative
Species:
Leishmania donovani
UniProt:
A0A3Q8IBR6_LEIDO
TriTrypDb:
LdBPK_300140.1 , LdCL_300006500 , LDHU3_30.0250
Length:
346

Annotations

Annotations by Jardim et al.

Membrane associated proteins, YIPF

Localization

Secreted promastigote
Source Evidence on protein Close homologs
Cuervo et al. no yes: 0
Hassani et al. no yes: 0
Forrest at al. (metacyclic) no yes: 0
Forrest at al. (procyclic) no yes: 0
Silverman et al. no yes: 0
Pissara et al. no yes: 0
Secreted amastigote
Source Evidence on protein Close homologs
Pires et al. no yes: 0
Exosome
Source Evidence on protein Close homologs
Silverman et al. no yes: 0
Glycosome
Source Evidence on protein Close homologs
Jamdhade et al. no yes: 0
Predictions
Source Evidence on protein Close homologs
DeepLoc
SignalP6 no yes: 0, no: 11
NetGPI no yes: 0, no: 11
Cellular components
Term Name Level Count
GO:0005794 Golgi apparatus 5 12
GO:0016020 membrane 2 12
GO:0043226 organelle 2 12
GO:0043227 membrane-bounded organelle 3 12
GO:0043229 intracellular organelle 3 12
GO:0043231 intracellular membrane-bounded organelle 4 12
GO:0110165 cellular anatomical entity 1 12

Expansion

Sequence features

A0A3Q8IBR6
Sequence
MSA
Disorder
Secondary
Topology
Domains
SignalP
GPI
Phosphorylations
ELMs

Structure

Predicted structure by AlphaFold2

Related structures:

AlphaFold database: A0A3Q8IBR6

Function

Biological processes
Term Name Level Count
GO:0006810 transport 3 12
GO:0016192 vesicle-mediated transport 4 12
GO:0051179 localization 1 12
GO:0051234 establishment of localization 2 12
Molecular functions
Term Name Level Count
GO:0005488 binding 1 12
GO:0005515 protein binding 2 12
GO:0019899 enzyme binding 3 12
GO:0031267 small GTPase binding 5 12
GO:0051020 GTPase binding 4 12

Putative motif mimicry

Leishmania From To Domain/Motif Score
CLV_NRD_NRD_1 179 181 PF00675 0.278
CLV_PCSK_SKI1_1 127 131 PF00082 0.286
DEG_APCC_DBOX_1 126 134 PF00400 0.497
DOC_CYCLIN_yClb5_NLxxxL_5 249 258 PF00134 0.453
DOC_CYCLIN_yCln2_LP_2 184 190 PF00134 0.417
DOC_MAPK_MEF2A_6 316 324 PF00069 0.453
DOC_USP7_MATH_1 101 105 PF00917 0.678
DOC_USP7_MATH_1 18 22 PF00917 0.628
DOC_USP7_MATH_1 199 203 PF00917 0.325
DOC_USP7_MATH_1 28 32 PF00917 0.668
DOC_USP7_MATH_1 4 8 PF00917 0.621
DOC_WW_Pin1_4 76 81 PF00397 0.660
LIG_14-3-3_CanoR_1 132 138 PF00244 0.510
LIG_Actin_WH2_2 117 134 PF00022 0.482
LIG_AP2alpha_2 12 14 PF02296 0.597
LIG_BIR_II_1 1 5 PF00653 0.594
LIG_BIR_III_1 1 5 PF00653 0.607
LIG_BIR_III_3 1 5 PF00653 0.607
LIG_BRCT_BRCA1_1 335 339 PF00533 0.274
LIG_deltaCOP1_diTrp_1 315 325 PF00928 0.457
LIG_FHA_1 124 130 PF00498 0.489
LIG_FHA_1 160 166 PF00498 0.664
LIG_FHA_1 195 201 PF00498 0.299
LIG_FHA_1 257 263 PF00498 0.453
LIG_FHA_1 297 303 PF00498 0.278
LIG_FHA_1 77 83 PF00498 0.753
LIG_FHA_2 167 173 PF00498 0.598
LIG_FHA_2 255 261 PF00498 0.449
LIG_FHA_2 310 316 PF00498 0.510
LIG_FHA_2 49 55 PF00498 0.684
LIG_IBAR_NPY_1 3 5 PF08397 0.601
LIG_LIR_Apic_2 110 116 PF02991 0.607
LIG_LIR_Gen_1 192 201 PF02991 0.241
LIG_LIR_Gen_1 228 239 PF02991 0.386
LIG_LIR_Gen_1 285 296 PF02991 0.306
LIG_LIR_Gen_1 298 309 PF02991 0.198
LIG_LIR_Gen_1 49 59 PF02991 0.646
LIG_LIR_Nem_3 109 115 PF02991 0.507
LIG_LIR_Nem_3 183 188 PF02991 0.406
LIG_LIR_Nem_3 192 198 PF02991 0.241
LIG_LIR_Nem_3 228 234 PF02991 0.386
LIG_LIR_Nem_3 285 291 PF02991 0.304
LIG_LIR_Nem_3 298 304 PF02991 0.188
LIG_LIR_Nem_3 334 340 PF02991 0.267
LIG_LIR_Nem_3 49 55 PF02991 0.723
LIG_PALB2_WD40_1 314 322 PF16756 0.510
LIG_PDZ_Class_2 341 346 PF00595 0.280
LIG_Pex14_1 113 117 PF04695 0.478
LIG_Pex14_1 220 224 PF04695 0.206
LIG_Pex14_1 297 301 PF04695 0.256
LIG_Pex14_2 117 121 PF04695 0.465
LIG_Pex14_2 293 297 PF04695 0.312
LIG_Pex14_2 325 329 PF04695 0.360
LIG_Pex14_2 337 341 PF04695 0.250
LIG_REV1ctd_RIR_1 339 346 PF16727 0.372
LIG_SH2_CRK 231 235 PF00017 0.406
LIG_SH2_CRK 237 241 PF00017 0.350
LIG_SH2_NCK_1 231 235 PF00017 0.306
LIG_SH2_NCK_1 52 56 PF00017 0.643
LIG_SH2_STAP1 222 226 PF00017 0.217
LIG_SH2_STAP1 231 235 PF00017 0.235
LIG_SH2_STAP1 267 271 PF00017 0.252
LIG_SH2_STAT5 210 213 PF00017 0.310
LIG_SH2_STAT5 235 238 PF00017 0.293
LIG_SH2_STAT5 301 304 PF00017 0.275
LIG_SH2_STAT5 340 343 PF00017 0.248
LIG_SH2_STAT5 52 55 PF00017 0.654
LIG_SH3_3 136 142 PF00018 0.519
LIG_SH3_3 84 90 PF00018 0.648
LIG_SUMO_SIM_anti_2 197 202 PF11976 0.346
LIG_SUMO_SIM_anti_2 273 279 PF11976 0.386
LIG_SUMO_SIM_par_1 196 202 PF11976 0.335
LIG_TRAF2_1 170 173 PF00917 0.648
LIG_TYR_ITIM 229 234 PF00017 0.386
LIG_TYR_ITSM 297 304 PF00017 0.335
LIG_UBA3_1 204 212 PF00899 0.306
LIG_UBA3_1 302 311 PF00899 0.306
MOD_CK1_1 104 110 PF00069 0.711
MOD_CK1_1 225 231 PF00069 0.223
MOD_CK1_1 31 37 PF00069 0.699
MOD_CK1_1 7 13 PF00069 0.680
MOD_CK2_1 166 172 PF00069 0.627
MOD_CK2_1 309 315 PF00069 0.510
MOD_CK2_1 48 54 PF00069 0.685
MOD_CMANNOS 307 310 PF00535 0.217
MOD_GlcNHglycan 30 33 PF01048 0.507
MOD_GlcNHglycan 48 51 PF01048 0.490
MOD_GlcNHglycan 6 9 PF01048 0.451
MOD_GlcNHglycan 75 79 PF01048 0.429
MOD_GSK3_1 103 110 PF00069 0.615
MOD_GSK3_1 190 197 PF00069 0.268
MOD_GSK3_1 199 206 PF00069 0.260
MOD_GSK3_1 254 261 PF00069 0.453
MOD_GSK3_1 31 38 PF00069 0.726
MOD_GSK3_1 46 53 PF00069 0.705
MOD_GSK3_1 76 83 PF00069 0.638
MOD_N-GLC_1 153 158 PF02516 0.431
MOD_N-GLC_1 213 218 PF02516 0.519
MOD_NEK2_1 131 136 PF00069 0.465
MOD_NEK2_1 153 158 PF00069 0.662
MOD_NEK2_1 194 199 PF00069 0.291
MOD_NEK2_1 258 263 PF00069 0.447
MOD_NEK2_1 309 314 PF00069 0.455
MOD_NEK2_1 331 336 PF00069 0.275
MOD_NEK2_2 265 270 PF00069 0.249
MOD_PIKK_1 101 107 PF00454 0.685
MOD_PIKK_1 214 220 PF00454 0.182
MOD_PKA_2 131 137 PF00069 0.477
MOD_Plk_1 153 159 PF00069 0.637
MOD_Plk_1 166 172 PF00069 0.685
MOD_Plk_1 222 228 PF00069 0.210
MOD_Plk_2-3 167 173 PF00069 0.650
MOD_Plk_4 133 139 PF00069 0.484
MOD_Plk_4 190 196 PF00069 0.254
MOD_Plk_4 265 271 PF00069 0.308
MOD_ProDKin_1 76 82 PF00069 0.664
TRG_DiLeu_BaEn_2 314 320 PF01217 0.510
TRG_ENDOCYTIC_2 118 121 PF00928 0.466
TRG_ENDOCYTIC_2 185 188 PF00928 0.406
TRG_ENDOCYTIC_2 231 234 PF00928 0.386
TRG_ENDOCYTIC_2 237 240 PF00928 0.350
TRG_ENDOCYTIC_2 267 270 PF00928 0.258
TRG_ENDOCYTIC_2 301 304 PF00928 0.300
TRG_ENDOCYTIC_2 52 55 PF00928 0.770

Homologs

Protein Taxonomy Sequence identity Coverage
A0A0N1PG17 Leptomonas seymouri 62% 95%
A0A0S4JRK9 Bodo saltans 62% 100%
A0A1X0P3E9 Trypanosomatidae 49% 95%
A0A422N136 Trypanosoma rangeli 49% 99%
A4HHV9 Leishmania braziliensis 90% 100%
A4I509 Leishmania infantum 100% 100%
C9ZQG2 Trypanosoma brucei gambiense (strain MHOM/CI/86/DAL972) 53% 97%
E9B0D9 Leishmania mexicana (strain MHOM/GT/2001/U1103) 96% 100%
Q4Q7U1 Leishmania major 96% 100%
Q54TS4 Dictyostelium discoideum 30% 100%
Q5RBL0 Pongo abelii 28% 100%
Q6P6G5 Rattus norvegicus 27% 100%
Q91VU1 Mus musculus 27% 100%
Q9UTD3 Schizosaccharomyces pombe (strain 972 / ATCC 24843) 25% 100%
Q9Y548 Homo sapiens 28% 100%
V5BLF2 Trypanosoma cruzi 48% 100%

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LeishMANIAdb - Server version: v0.0.2. - Database version: v0.0.1. - ChangeLog - © 2022-2025 Protein Bioinformatics Research Group, Institute of Enzymology, RCNS